14 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Rpic_3809  CDS  NC_010678  57801  58388  +  588  Fimbrial protein  YP_001892352  decreased coverage  0.00136767  normal  0.0813635  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4223  CDS  NC_010678  505450  506982  -  1533  RND efflux system, outer membrane lipoprotein, NodT family  YP_001892747  decreased coverage  0.00337155  normal  1  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4350  CDS  NC_010678  653239  654120  +  882  hypothetical protein  YP_001892872  decreased coverage  0.00630082  normal  1  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4467  CDS  NC_010678  784430  785002  -  573  putative transmembrane protein  YP_001892987  decreased coverage  0.00546453  normal  0.335651  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4669  CDS  NC_010678  999638  1003375  +  3738  nitrate reductase, alpha subunit  YP_001893181  decreased coverage  0.00847712  normal  1  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4707  CDS  NC_010678  1050910  1051689  -  780  Enoyl-CoA hydratase/isomerase  YP_001893218  normal  0.287025  decreased coverage  0.00358317  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4708  CDS  NC_010678  1051686  1052120  -  435  transcriptional regulator, MarR family  YP_001893219  normal  0.155133  decreased coverage  0.00302291  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4709  CDS  NC_010678  1052117  1053004  -  888  alpha/beta hydrolase-like protein  YP_001893220  normal  0.0396894  decreased coverage  0.00396778  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4713  CDS  NC_010678  1056033  1056707  +  675  Phosphoglycerate mutase  YP_001893224  normal  0.119868  decreased coverage  0.00406557  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4714  CDS  NC_010678  1056771  1057535  +  765  short chain dehydrogenase  YP_001893225  normal  0.0274692  decreased coverage  0.00406557  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4715  CDS  NC_010678  1057608  1058525  +  918  beta-lactamase domain protein  YP_001893226  normal  0.515009  decreased coverage  0.00436912  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4760  CDS  NC_010678  1097864  1098466  +  603  hypothetical protein  YP_001893271  decreased coverage  0.00298673  normal  1  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4912  CDS  NC_010678  1263058  1264428  +  1371  Carbohydrate-selective porin OprB  YP_001893423  decreased coverage  0.00363735  normal  1  Ralstonia pickettii 12J  Bacteria 
 
 
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Rpic_4913  CDS  NC_010678  1264460  1265467  +  1008  D-xylose ABC transporter, periplasmic substrate-binding protein  YP_001893424  decreased coverage  0.00296988  normal  1  Ralstonia pickettii 12J  Bacteria 
 
 
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