17 homologs were found in PanDaTox collection
for query gene Xaut_0410 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009720  Xaut_0410  transcription activator effector binding  100 
 
 		 227 aa  457  9.999999999999999e-129  Xanthobacter autotrophicus Py2  Bacteria  normal  0.122194  normal  0.857811 
 
 
-
 
NC_007925  RPC_0216  transcription activator, effector binding  43.71 
 
 		 252 aa  127  1.0000000000000001e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.05327  hitchhiker  0.00731322 
 
 
-
 
NC_007964  Nham_3576  transcription activator, effector binding  43.92 
 
 		 242 aa  127  1.0000000000000001e-28  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2777  transcription activator, effector binding  43.24 
 
 		 242 aa  125  5e-28  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0772774  normal  1 
 
 
-
 
NC_007958  RPD_0513  transcription activator, effector binding  39.86 
 
 		 268 aa  125  6e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.482512  normal  1 
 
 
-
 
NC_011004  Rpal_0250  transcription activator effector binding  41.72 
 
 		 260 aa  124  1e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.495724  n/a   
 
 
-
 
NC_007778  RPB_0358  transcription activator, effector binding  40.54 
 
 		 243 aa  122  3e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.923721  normal  1 
 
 
-
 
NC_009485  BBta_0371  hypothetical protein  41.33 
 
 		 240 aa  118  7.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.548098  normal  0.611025 
 
 
-
 
NC_010172  Mext_2719  transcription activator effector binding  36.84 
 
 		 257 aa  113  2.0000000000000002e-24  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_2946  transcription activator effector binding  37.37 
 
 		 298 aa  114  2.0000000000000002e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.433346  hitchhiker  0.00143394 
 
 
-
 
NC_010725  Mpop_2841  transcription activator effector binding  36.32 
 
 		 249 aa  111  9e-24  Methylobacterium populi BJ001  Bacteria  normal  0.491142  normal  0.203894 
 
 
-
 
NC_010505  Mrad2831_5334  transcription activator effector binding  34.2 
 
 		 255 aa  110  1.0000000000000001e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal  1 
 
 
-
 
NC_011666  Msil_1851  transcription activator effector binding  36.84 
 
 		 241 aa  106  3e-22  Methylocella silvestris BL2  Bacteria  n/a    normal  0.493771 
 
 
-
 
NC_010581  Bind_3021  transcription activator effector binding  38.19 
 
 		 219 aa  102  4e-21  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0182  transcription activator effector binding  33.56 
 
 		 236 aa  102  6e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_3657  transcription activator effector binding  30.82 
 
 		 259 aa  95.5  6e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.217912  hitchhiker  0.00540131 
 
 
-
 
NC_008752  Aave_4607  transcription activator, effector binding  22 
 
 		 156 aa  44.3  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0684789  normal  1 
 
 
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