14 homologs were found in PanDaTox collection
for query gene Tfu_1476 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_1476  hypothetical protein  100 
 
 
178 aa  360  6e-99  Thermobifida fusca YX  Bacteria  normal  0.0587792  n/a   
 
 
-
 
NC_008687  Pden_3538  TRAP dicarboxylate family transporter DctQ subunit  29.41 
 
 
168 aa  68.2  0.00000000007  Paracoccus denitrificans PD1222  Bacteria  normal  0.174201  normal 
 
 
-
 
NC_008786  Veis_2186  hypothetical protein  31.36 
 
 
170 aa  57.4  0.00000009  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0635  TRAP dicarboxylate family transporter DctQ subunit  26.95 
 
 
172 aa  54.3  0.0000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.691429  n/a   
 
 
-
 
NC_009049  Rsph17029_2288  tripartite ATP-independent periplasmic transporter DctQ  28.17 
 
 
172 aa  54.7  0.0000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.212485  normal  0.248733 
 
 
-
 
NC_012850  Rleg_3674  Tripartite ATP-independent periplasmic transporter DctQ component  26.19 
 
 
179 aa  49.3  0.00003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.396791 
 
 
-
 
NC_007908  Rfer_2871  tripartite ATP-independent periplasmic transporter DctQ  27.5 
 
 
202 aa  45.1  0.0005  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1068  Tripartite ATP-independent periplasmic transporter DctQ component  22.36 
 
 
177 aa  44.7  0.0008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.261575  n/a   
 
 
-
 
NC_007802  Jann_3518  tripartite ATP-independent periplasmic transporter DctQ  26.67 
 
 
211 aa  43.1  0.002  Jannaschia sp. CCS1  Bacteria  normal  hitchhiker  0.00174485 
 
 
-
 
NC_007973  Rmet_2752  tripartite ATP-independent periplasmic transporter DctQ  27.48 
 
 
180 aa  43.1  0.002  Cupriavidus metallidurans CH34  Bacteria  normal  0.328918  normal 
 
 
-
 
NC_009784  VIBHAR_04933  TRAP-type C4-dicarboxylate transport system permease component  24.52 
 
 
180 aa  42.4  0.003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011989  Avi_3769  hypothetical protein  22.54 
 
 
179 aa  42  0.004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0449  tripartite ATP-independent periplasmic transporter DctQ  25.16 
 
 
188 aa  41.6  0.006  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3372  Tripartite ATP-independent periplasmic transporter DctQ component  23.21 
 
 
179 aa  40.8  0.009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.779768 
 
 
-
 
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