Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3769 |
Symbol | |
ID | 7388225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3137497 |
End bp | 3138036 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643652541 |
Product | hypothetical protein |
Protein accession | YP_002550722 |
Protein GI | 222149765 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTT TGCTAGGGTG GAGCCGGGCT ATCGACACGC TGAGCGAAGT CGTTGGCCGG GTGGCGGAAT ATCTGGTGCT GCTGTGCTGC CTGATCAGCG CGGCCAATGC GATCATCCGA TATCTTTTCA ATATCAGTTC CAATGGCTGG TTGGAGATCC AATGGTATCT CTTTGCCTAT GTCGTTGTGC TGGGAGCTGC CCATACATTG CGCCAGAACG GCCATGTGCG GGTTGACCTG ATTTATGGCG CGGTCTCCGA GCGCAAACGC TTGTGGATCG ACCTGATCGG CATCGTGTTT TTTCTGCTTC CGGTTTGCAT CTATCTGACC TGGCTGTGCT GGCCGTTTTT CTGGCTTTCC TATCAGCAGG GCGAAATGTC GGCCAATGCC GGTGGCCTGA TCCGCTGGCC GGTCAAGCTT ATTCTGGTTG CCGGATTCGG GCTTCTGGTG TTGCAGGGCC TGTCGGAAAT GGTGAAGCGC ATCGCTGCGC TGACGGGACA CCTGCATATC GACGTGCGCT ACGAAAAGCC GCTGCAATAA
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Protein sequence | MAVLLGWSRA IDTLSEVVGR VAEYLVLLCC LISAANAIIR YLFNISSNGW LEIQWYLFAY VVVLGAAHTL RQNGHVRVDL IYGAVSERKR LWIDLIGIVF FLLPVCIYLT WLCWPFFWLS YQQGEMSANA GGLIRWPVKL ILVAGFGLLV LQGLSEMVKR IAALTGHLHI DVRYEKPLQ
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