Gene Avi_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3769 
Symbol 
ID7388225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3137497 
End bp3138036 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID643652541 
Producthypothetical protein 
Protein accessionYP_002550722 
Protein GI222149765 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTT TGCTAGGGTG GAGCCGGGCT ATCGACACGC TGAGCGAAGT CGTTGGCCGG 
GTGGCGGAAT ATCTGGTGCT GCTGTGCTGC CTGATCAGCG CGGCCAATGC GATCATCCGA
TATCTTTTCA ATATCAGTTC CAATGGCTGG TTGGAGATCC AATGGTATCT CTTTGCCTAT
GTCGTTGTGC TGGGAGCTGC CCATACATTG CGCCAGAACG GCCATGTGCG GGTTGACCTG
ATTTATGGCG CGGTCTCCGA GCGCAAACGC TTGTGGATCG ACCTGATCGG CATCGTGTTT
TTTCTGCTTC CGGTTTGCAT CTATCTGACC TGGCTGTGCT GGCCGTTTTT CTGGCTTTCC
TATCAGCAGG GCGAAATGTC GGCCAATGCC GGTGGCCTGA TCCGCTGGCC GGTCAAGCTT
ATTCTGGTTG CCGGATTCGG GCTTCTGGTG TTGCAGGGCC TGTCGGAAAT GGTGAAGCGC
ATCGCTGCGC TGACGGGACA CCTGCATATC GACGTGCGCT ACGAAAAGCC GCTGCAATAA
 
Protein sequence
MAVLLGWSRA IDTLSEVVGR VAEYLVLLCC LISAANAIIR YLFNISSNGW LEIQWYLFAY 
VVVLGAAHTL RQNGHVRVDL IYGAVSERKR LWIDLIGIVF FLLPVCIYLT WLCWPFFWLS
YQQGEMSANA GGLIRWPVKL ILVAGFGLLV LQGLSEMVKR IAALTGHLHI DVRYEKPLQ