| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3538 |
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| Symbol | |
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| ID | 4582093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 686930 |
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| End bp | 687436 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639770851 |
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| Product | TRAP dicarboxylate family transporter DctQ subunit |
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| Protein accession | YP_917304 |
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| Protein GI | 119386249 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.174201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAGC TGACGGAAAA ACTGACGCAT CTTCTGGGAT GGATAGCGGG GGTGACGGTT
CTGCTGATGA TGTTCCACGT CATGATCGAC GTGATCGGCA AATATGCCTT CAACGCGCCC
TTGCCGGGCA CGGCCGAAGT GGTCGCGGCC TATTACATGA TCGCCTGCGT GTTCCTGCCG
CTGGCCTGGG TCGAGGCTGC GGGCGGCTCG ATCGTCGTCG AGGTCGTCTA TGAAAAGGTG
CCGCCCCGCG CCCAGGCGGT CATGCTCAGG CTCGCCGATA TGGTCTCGGT CGTCTACTAC
GCGATCCTCG GCTGGTTCTC CTGGGGCGTG GCCACGCATG CCTGGCGCAT AAACGAAACG
GTGGACGGCA TCTGGCGGAT CACCACCTGG CCGGCCAAGT TCCTGCTGCC CTTCGGCTTT
TTCCTGGCGG TCGTGGTCAT CCTGTTGCGG CTGGTCCTGG GGGACCGGGG TCGCATCCGC
ACCGCTGCCC ATGCTCTGGA CATCTGA
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| Protein sequence | MVKLTEKLTH LLGWIAGVTV LLMMFHVMID VIGKYAFNAP LPGTAEVVAA YYMIACVFLP
LAWVEAAGGS IVVEVVYEKV PPRAQAVMLR LADMVSVVYY AILGWFSWGV ATHAWRINET
VDGIWRITTW PAKFLLPFGF FLAVVVILLR LVLGDRGRIR TAAHALDI
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