| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2871 |
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| Symbol | |
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| ID | 3962396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3171197 |
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| End bp | 3171805 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637917690 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_524113 |
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| Protein GI | 89901642 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAC TCTTGAAATT TTCCAAAGCG GTCGATTGGC TCAACCGTCA GGTGGGCAAA
TATGTTATTT GGCTGATTCT GGCCTCCACC GTCGTCAGTG CCATCAACGC CATTGTGCGC
AAGGCATTCA ATGTCAGTTC CAACGCGTAT CTCGAGGTGC AATGGTATCT GTTTGCCGCC
ACGTTCTTGC TGTGTTCGGC CTACACGCTG CTCAACGGTG AGCACGTCAA GATTGACGTG
CTTTACGGCC ACTGGTCGAA ACGGGCACAA ATGTGGATCG ATGTGTTCGG ATTCACCTGT
TTCCTGCTGC CCTTTTGCAG TGCCTTCCTG TGGTTCGGCG TGCCTTTCTT CCTCAAGGGC
TTTTACTCGG GCGAGGTGTC GTCGAACGCC GGTGGACTGA TACGCTGGCC GGTGTACGCC
ATGATCCCGC TGGGCTTTGG CCTGTTGTTT TTGCAGGGTG TTTCCGAACT GATCAAACGC
CTGGCGTTCC TGATGGGTCT GATTGACGAT CCCACGCACA AACAGATCGA AAAGACGGCA
GAAGAGGAAT TGGCCGAGGC AATTCAAAAA CTGGCCGAAG AAAAAGCAGC CAAAGCCAAC
GCTGCCTGA
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| Protein sequence | MQALLKFSKA VDWLNRQVGK YVIWLILAST VVSAINAIVR KAFNVSSNAY LEVQWYLFAA
TFLLCSAYTL LNGEHVKIDV LYGHWSKRAQ MWIDVFGFTC FLLPFCSAFL WFGVPFFLKG
FYSGEVSSNA GGLIRWPVYA MIPLGFGLLF LQGVSELIKR LAFLMGLIDD PTHKQIEKTA
EEELAEAIQK LAEEKAAKAN AA
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