| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3518 |
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| Symbol | |
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| ID | 3935992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3575092 |
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| End bp | 3575727 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905892 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_511460 |
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| Protein GI | 89056009 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00174485 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGTGG GATCCCTTGT CCTGACCGAC GACAGTCGCA TCAGCCGCCT CGACCAGGCG
CTGCACAAGC TGGAACTTGT CACAATCATC ATCGGCGGGC TGACCGTCTT TGCCCTGATG
CTGCTCGCTG TCTTCTCCGT CGGCGGGCGG AACTTCTTCA ACGCACCTCT GCCCGGCTAT
GTCGATTGGA TCGAGCAGTT GATGCCGGTG ATCGCCATCC TTGGTGTCGC CTATGTTAGC
CGCGAGGGGG GGCATATCCG CATGGATATT CTGGTCGGCA TGCTCAAGGG TCGCGCGCTT
TGGGCGGCAG AGTTCGTCAC GACACTGGCC ATCTTCATCT TCGCGCTGTT GCTTCTTTGG
GGCAGCTGGA CCCACTTCGA CCGCAGCTTT GAGTTTGGCC AGCCGATGTG GTCGCGTGAC
AGTTCCATGG ACATTGGCCT GCCGATCTGG CCCGCGAAAC TGGTGGTGCC CTTCGCGCTC
TGCATCCTGA ACCTGCGCCT CATCCTGCAA CTCTGGGCCT ACGGCACCGC GTTCGCGACC
AACGCCGAGC GCCCCGTGGC CGTTCCACTT GTGGCCGATG TCGCCACCCA AGCCGCGATG
GAGGCCAGGC AGGTCTCCGG TCGCGACGAC GTTTGA
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| Protein sequence | MAVGSLVLTD DSRISRLDQA LHKLELVTII IGGLTVFALM LLAVFSVGGR NFFNAPLPGY
VDWIEQLMPV IAILGVAYVS REGGHIRMDI LVGMLKGRAL WAAEFVTTLA IFIFALLLLW
GSWTHFDRSF EFGQPMWSRD SSMDIGLPIW PAKLVVPFAL CILNLRLILQ LWAYGTAFAT
NAERPVAVPL VADVATQAAM EARQVSGRDD V
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