Gene Dhaf_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1068 
Symbol 
ID7258036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1163024 
End bp1163557 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID643560982 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002457564 
Protein GI219667129 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.261575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGGT TTTGGCGGGC GTTTAATTTT TTAGAGGACA TCCTTGCTGG TGGATTGTTG 
TTCATCGGAG TAACCGTCAT CTTTTACGGA GTAATCATGC GTTATTTTTT TAATGACCCT
CAACCTTGGG TGGATGAAAT CTCGCAGTGG TTAATTATTT GGGGGACCTT GATTGGAGCC
AGTGTGGCCT TAAGGAATAA CCACCATATA TCAGTGGAAA TGCTTTATGA TCGTCTACCC
TTAAGGGGCC GATTTATGGT CACTATTTTT GCCCATATGG TAGGACTTCT CTTTGGTATC
TTTGTTCTTC GCTATGGTTT TGAGCTGGTA GCGTTTGTAC ACAAAACAGG GCAGAAGTCC
ACGGATACGG GAATATTTTT ATATATTGTT TACTTTATCT TACCTTTGAT GGGAGCGCTT
TTGTCTATGC GTTTTGTGGT TAAACTTTAT GAAACGTTGA AAAATGGCGG CAAGGACTGG
ATGGCGGAGC AGGAAAGGAG CGTGAAGTCT GATGACCACA GCTTTACTGT TTAG
 
Protein sequence
MKRFWRAFNF LEDILAGGLL FIGVTVIFYG VIMRYFFNDP QPWVDEISQW LIIWGTLIGA 
SVALRNNHHI SVEMLYDRLP LRGRFMVTIF AHMVGLLFGI FVLRYGFELV AFVHKTGQKS
TDTGIFLYIV YFILPLMGAL LSMRFVVKLY ETLKNGGKDW MAEQERSVKS DDHSFTV