18 homologs were found in PanDaTox collection
for query gene Ssed_1969 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_1969  hypothetical protein  100 
 
 		 233 aa  491  9.999999999999999e-139  Shewanella sediminis HAW-EB3  Bacteria  normal  0.894379  normal  1 
 
 
-
 
NC_009831  Ssed_2141  hypothetical protein  35.85 
 
 		 277 aa  62.4  0.000000006  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.0962248 
 
 
-
 
NC_009831  Ssed_2142  hypothetical protein  34.26 
 
 		 253 aa  59.7  0.00000004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.532898  normal  0.0656443 
 
 
-
 
NC_009831  Ssed_2144  hypothetical protein  47.62 
 
 		 253 aa  57  0.0000003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.389277  normal  0.0100675 
 
 
-
 
NC_009831  Ssed_0526  hypothetical protein  39.29 
 
 		 267 aa  52  0.000009  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0690  LuxR family transcriptional regulator  29.41 
 
 		 252 aa  52  0.000009  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0755  hypothetical protein  28.91 
 
 		 249 aa  50.1  0.00003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.684175  hitchhiker  0.00000180736 
 
 
-
 
NC_009831  Ssed_3996  hypothetical protein  31.46 
 
 		 185 aa  48.1  0.0001  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.41061 
 
 
-
 
NC_009901  Spea_3578  LuxR family transcriptional regulator  33.67 
 
 		 255 aa  47.4  0.0002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.920861  n/a   
 
 
-
 
NC_009831  Ssed_2091  hypothetical protein  30 
 
 		 245 aa  47.8  0.0002  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0353766  normal  1 
 
 
-
 
NC_004347  SO_4624  LuxR family transcriptional regulator  33.33 
 
 		 248 aa  44.7  0.001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_4008  LuxR family transcriptional regulator  31.88 
 
 		 248 aa  43.9  0.002  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_3799  response regulator receiver protein  32.39 
 
 		 248 aa  42.7  0.004  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_4329  LuxR family transcriptional regulator  32.39 
 
 		 248 aa  42.7  0.005  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_4197  response regulator receiver protein  32.39 
 
 		 248 aa  42.7  0.005  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1731  hypothetical protein  25.85 
 
 		 240 aa  42.4  0.006  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.000000145681 
 
 
-
 
NC_007777  Francci3_4209  two component LuxR family transcriptional regulator  35.44 
 
 		 201 aa  42  0.008  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_2457  hypothetical protein  44.44 
 
 		 240 aa  42  0.009  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.418113 
 
 
-
 
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