| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4008 |
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| Symbol | |
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| ID | 4480222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4812072 |
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| End bp | 4812818 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639728623 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_871631 |
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| Protein GI | 117922439 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCTA AACATGCGCT ATCAAATGCC AGTACAGTAT CGACGTTAAA AGATGTTATT
CAGGGGATTA GTACTTCATT GAAACTGCAC GGTTTTAGTG GTTTCTGGTT TCAAGGGATC
CCACACTGCG CCTATGAAAA CTATCATTTT CCGGAAGATA CTAGTCTCTT TTCCCCAATA
GCACTGCGTA AACCGATCGC TAGCGTAGCT TCTTCACCCA TCGTTGCTCA ATTGCAGCGT
TTTTATTTAA ATCAGGTGGC AGCTAATGAC ACTAATTTTG GGCTTTCACT CGATACATCA
AAACCCTATG TATATAGACT GACAAATGAA AAAGATACTA AGGCCTGTGC GTTGTTTCAG
AAACACAATA TTCAAACAGT CTTGAGTTGG CCGATTGTGT GTCACGACCA ATGTCGTTGG
ACTGGCCGCT TTATGCTGTT GAGTCAACAA AGTTACTCAG AAATTGTGTT AGACGGATTG
GCCGATGTGT TGAAGGAGGC TCAGTACAAA CTGTTTGAAT GCAACAAGCC AATGTTTAAC
CCATTTCTAC AAAGTTCCCT GCTAAAAGAA AATGCCAGAG ATATTTTGCA AATGGTCGCC
AATGGTCTGC AAAACGATGA AATTTCTACT CAGCTCCCGA TAAGTGTTAG GGGAGTTGAA
TATCATATGG AATCCATGCG AAAAAAATTT GGTGCAGCTA ATCGAGCAAA CTTGATTCAT
TTGGCACATC AATATGAGTT GATTTAA
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| Protein sequence | MDAKHALSNA STVSTLKDVI QGISTSLKLH GFSGFWFQGI PHCAYENYHF PEDTSLFSPI
ALRKPIASVA SSPIVAQLQR FYLNQVAAND TNFGLSLDTS KPYVYRLTNE KDTKACALFQ
KHNIQTVLSW PIVCHDQCRW TGRFMLLSQQ SYSEIVLDGL ADVLKEAQYK LFECNKPMFN
PFLQSSLLKE NARDILQMVA NGLQNDEIST QLPISVRGVE YHMESMRKKF GAANRANLIH
LAHQYELI
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