| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4209 |
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| Symbol | |
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| ID | 3907174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5025556 |
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| End bp | 5026161 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637881536 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_483285 |
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| Protein GI | 86742885 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC GCATAGTTGT CGCCGTCCAA CATCTTCTGA TACTGGAGGC AATTGTCGAG
TCTTTGGAAA AAGTGGCAAA TTTCAACATC GTTGGCAAAG TAGCCGAACC CAAATACCTC
GTACCCACCA CACTCCAGGT GCGGCCGGAG GTCGTGGTGG TGGATGCTGA GGGATTCGCG
TGGGAATCTC TTCCCCGGGC CGCCGGGACG CGACGAGTGA GCCCGAGGCT CGGTGTCATC
CTCATGGCAA CGCTGCCCTC GCGCGGTCTT GTCGACAAGG CCCTCAAGGG AGGCGTGCTG
GGTATCGTGT CCAAACAAAC CGGGCTACGA CACCTCATCG ACGCCATCAG TGGCGCCGCA
GCCGGCTACA TGATCATCAA TCCAACACTG CTTTGGGCCC CGCCGACGAA GTGCGGGCCC
TTATCCGAAA GGGAGGCGGA GATCCTGCGC CTGACGGCAT CAGGTGCTTC TGTGAAAGAG
ATAGCGCACG ATATGCATCT CGCCGCGGGG ACGGTACGGA ATCTCACATC CGCGGCTATC
AAGAAACTCA ACGCACGTAA TCGCTTCGAT GCCGCACGGA TAGCAAGTGA ACGATGTTTG
ATCTGA
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| Protein sequence | MSIRIVVAVQ HLLILEAIVE SLEKVANFNI VGKVAEPKYL VPTTLQVRPE VVVVDAEGFA
WESLPRAAGT RRVSPRLGVI LMATLPSRGL VDKALKGGVL GIVSKQTGLR HLIDAISGAA
AGYMIINPTL LWAPPTKCGP LSEREAEILR LTASGASVKE IAHDMHLAAG TVRNLTSAAI
KKLNARNRFD AARIASERCL I
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