| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4624 |
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| Symbol | |
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| ID | 1172207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4819728 |
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| End bp | 4820474 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637346333 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | NP_720140 |
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| Protein GI | 24376097 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGCTA AACTGGCGCT ATCAAATGCC AATACGGCAT CGACATTACA AGACGTTATT
CAGGCGATAA GTGCTGCTTT GAAACCGCAC GGTTTTAGTG GATTCTGGTT TCAAGGGATC
GCACATTGTG CGTATGAAAA CTATCACTTT CCAAAAGAAA CCAATCTGTT CTCGCAAGCC
TCGTTGCGTA AACCCACTGC CAGCGTAGCG TCATCCCCTA AAGTTGCCCA ATTGCAGCGT
TTTTATTTAA GTCAGATTGC CGCTTATGAT TTTAATTTTG GTTTTTCGTT AGATACGTCA
AAATCTTATA TGTATCGCTT GTCGTGTGAG AAAAGTGATA AGGCTCGCCG ACTTTTTAAT
AAGCACCATA TTCAAACTGT ATTAAGTTGG CCCGTTGCAT GCCATAGCAA TCGACATTGG
GCAGGTCGCT TTATTCTGCT GAGTCATCTG AGTGATTCAG ACATCCAATT AACGGGTTTG
AGTGCGACCT TAAAGGATGC CCAAAACAAG CTATTTGAAT GGAATAAGTC ATTGTTTAAT
CCGTTTCTTC AAAGCTCTCT ACTTAAAGAT AATGCGAGAG ATATCTTAGT TATGGTCGCA
AACGGCCTGC AGAATGACGA AATTTCAACC CAGCTCCCGA TAAGTATTAG GGGAGTTGAA
TACCATATGG AATCAATGCG TAGGAAGTTT GGGGCGACGA ATCGAGCAAA CTTAATTCAT
CTCGCCCATC AATATGAGTT GATCTAA
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| Protein sequence | MDAKLALSNA NTASTLQDVI QAISAALKPH GFSGFWFQGI AHCAYENYHF PKETNLFSQA
SLRKPTASVA SSPKVAQLQR FYLSQIAAYD FNFGFSLDTS KSYMYRLSCE KSDKARRLFN
KHHIQTVLSW PVACHSNRHW AGRFILLSHL SDSDIQLTGL SATLKDAQNK LFEWNKSLFN
PFLQSSLLKD NARDILVMVA NGLQNDEIST QLPISIRGVE YHMESMRRKF GATNRANLIH
LAHQYELI
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