11 homologs were found in PanDaTox collection
for query gene Smal_3681 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_3681  Roadblock/LC7 family protein  100 
 
 
138 aa  258  3e-68  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.190619  normal 
 
 
-
 
NC_010002  Daci_0557  hypothetical protein  34.17 
 
 
133 aa  53.5  0.000001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1325  roadblock/LC7 family protein  32.79 
 
 
230 aa  50.4  0.000007  Acidothermus cellulolyticus 11B  Bacteria  normal  0.251377  normal  0.0893662 
 
 
-
 
NC_009712  Mboo_1908  roadblock/LC7 family protein  31.67 
 
 
115 aa  45.8  0.0002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.129097  normal  0.495291 
 
 
-
 
NC_011884  Cyan7425_2399  Roadblock/LC7 family protein  40.54 
 
 
122 aa  45.8  0.0002  Cyanothece sp. PCC 7425  Bacteria  normal  0.315858  normal  0.818253 
 
 
-
 
NC_013093  Amir_2067  Roadblock/LC7 family protein  36.54 
 
 
142 aa  45.8  0.0002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_5249  Roadblock/LC7 family protein  35.05 
 
 
119 aa  45.4  0.0003  Cyanothece sp. PCC 7425  Bacteria  normal  0.955788  normal  0.810313 
 
 
-
 
NC_009921  Franean1_5471  roadblock/LC7 family protein  29.52 
 
 
147 aa  42.7  0.002  Frankia sp. EAN1pec  Bacteria  normal  0.886108  normal 
 
 
-
 
NC_013510  Tcur_3804  Roadblock/LC7 family protein  35 
 
 
141 aa  42.4  0.002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3227  roadblock/LC7 family protein  30.3 
 
 
141 aa  40.4  0.007  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5171  Roadblock/LC7 family protein  30 
 
 
147 aa  40.4  0.009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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