Gene Mboo_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1908 
Symbol 
ID5410865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1971711 
End bp1972058 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content48% 
IMG OID640869146 
Productroadblock/LC7 family protein 
Protein accessionYP_001405066 
Protein GI154151448 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.129097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.495291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC CGTTATTAGA TGAATTTCTG AGAGTTGAAG GCGTATCGGC GGCAGTTGTG 
GTGGGGAGGG ACGGATTTGT AATAGAAAGC GCCGTATCCG GTAAGGTAGA TATCGAGGCG
CTGGGAGCTA TGGCATCGAC CGGCCTTGGG ACATCAGAAG CAATGGGTAA TACCCTCGGG
AAAGGCGAGC TTTCCCAGAT GCTGGTCGAA TTGGAAAAAG GGCCTATTAT TCTTGCACCT
TTATCCGCAG ATGAACTGAT AGCACTTGTC GCAGATACAA CTGCAAATAT CGGTAGAATC
CGTTATGAAT TAAAGAAGAA CAAGGAACGC ATTGTTGCGG CCCTTTAG
 
Protein sequence
MLKPLLDEFL RVEGVSAAVV VGRDGFVIES AVSGKVDIEA LGAMASTGLG TSEAMGNTLG 
KGELSQMLVE LEKGPIILAP LSADELIALV ADTTANIGRI RYELKKNKER IVAAL