| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5471 |
|---|
| Symbol | |
|---|
| ID | 5673802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6617148 |
|---|
| End bp | 6617591 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641244326 |
|---|
| Product | roadblock/LC7 family protein |
|---|
| Protein accession | YP_001509732 |
|---|
| Protein GI | 158317224 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.886108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGATC AGACCAATCG CCAGCCGGAC CACGACTTCA GCTGGCTGAT CAATGACTTC
GTCGGCAAGG TCCACGGCGT CACCCATGCC CTGATCCTCT CGTCCGACGG CCTGTCGCTC
ACCGCGTCCG ATGGGGTGAG CTCGGCGGAG CGGGACCAGC TGGCGGCGAT AGCCAGCGCG
ATGCTCAGCC TTGCCCGCAA CAGCGCGACG CTGTTCGACC GCGGAACCTG CGAGCAGATC
ATCGTGCGGC TCAGCGGCGG CTACTTCCTG TTCATGAGCA TCGACGAGGG AGCGGGACTC
GCCGTGCTGA CCGGACCGGA CTGCGACATG AAGGTGGTCG GCTACGAGAT GACGCAGTTC
GTACTGCACG CCGGCCACGC GCTCACCCCG GACCGGCGCG CGGACCTGCG CCGCGTCCTG
GTCGGACGTC AGGTACCGAG CTGA
|
|---|
| Protein sequence | MTDQTNRQPD HDFSWLINDF VGKVHGVTHA LILSSDGLSL TASDGVSSAE RDQLAAIASA
MLSLARNSAT LFDRGTCEQI IVRLSGGYFL FMSIDEGAGL AVLTGPDCDM KVVGYEMTQF
VLHAGHALTP DRRADLRRVL VGRQVPS
|
|---|
| |