14 homologs were found in PanDaTox collection
for query gene Shew185_0765 on replicon NC_009665
Organism: Shewanella baltica OS185



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_1684  phage tape measure protein  59.11 
 
 
1292 aa  1387    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0765  phage tail tape measure protein, TP901 family  100 
 
 
1306 aa  2565    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0789  phage tape measure protein  91.42 
 
 
1306 aa  2291    Shewanella baltica OS223  Bacteria  normal  normal  0.204936 
 
 
-
 
NC_009052  Sbal_3592  TP901 family phage tail tape measure protein  48.32 
 
 
1426 aa  420  1e-116  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0797  TP901 family phage tail tape measure protein  47.98 
 
 
1426 aa  418  9.999999999999999e-116  Shewanella baltica OS195  Bacteria  normal  normal  0.274443 
 
 
-
 
NC_007954  Sden_3243  Phage tail tape measure protein TP901, core region  71.43 
 
 
1419 aa  391  1e-107  Shewanella denitrificans OS217  Bacteria  normal  0.948991  n/a   
 
 
-
 
NC_004347  SO_0680  hypothetical protein  40.91 
 
 
1308 aa  284  1e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1388  hypothetical protein  34.59 
 
 
346 aa  157  2e-36  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3355  putative tape measure protein  36.72 
 
 
775 aa  155  2.9999999999999998e-36  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2697  hypothetical protein  34.38 
 
 
553 aa  141  7.999999999999999e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_2149  phage tape measure protein  27.56 
 
 
1308 aa  66.6  0.000000003  Shewanella baltica OS195  Bacteria  normal  0.843593  normal 
 
 
-
 
NC_009665  Shew185_2103  phage tape measure protein  26.98 
 
 
1307 aa  63.2  0.00000003  Shewanella baltica OS185  Bacteria  normal  0.56214  n/a   
 
 
-
 
NC_011769  DvMF_1643  phage tape measure protein  30.58 
 
 
938 aa  58.9  0.0000007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009783  VIBHAR_01999  hypothetical protein  25.79 
 
 
997 aa  48.1  0.001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>