| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01999 |
|---|
| Symbol | |
|---|
| ID | 5556374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 1990862 |
|---|
| End bp | 1993855 |
|---|
| Gene Length | 2994 bp |
|---|
| Protein Length | 997 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640907486 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445191 |
|---|
| Protein GI | 156974284 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5283] Phage-related tail protein |
|---|
| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATC AATCTAAGTA TCAAGTTGCC ATTGCAGCGA TTGACCAATA CTCCGCACCT
CTCAAGGCGG CAAGCGCATC GTTTGACTCA CTGACTGAGG ATGTTAAAGC TCAGTCGGCA
GAGATCAAAA AGCTCAATGC CAGTGCCGCC AGCCTTAACT CTTACGCGAG CATTAAGCGT
GATTTAACTG AAACGTCAGC TCAAATGGGC TCGGCTAAAG TGAAAGCGGA GCAGTTGGCT
GTAGCCACAA AGGAGCTTAG TCTCCAAACG AAAGGCTACG AGTCAGCAGT TTCTAGTTCT
CAAAGTAAGC TTCAAAACCT TGAAGCTCAA ATGAGGGCAA CGGAACACCC GAGTAAAGCT
CTGCGAACAG CCATTAAGGA AGCTCGCAAA GAAGTTAAAC TCAATACAGC CAATCTTAAC
GAACATCAGC TGCAGCTGAG TAAAACACAG GCTGCTTATG ATAAATCACG TCATGAAGTT
TCCCAGCTCA CCAAGCACTA CGATGTTCAG AGAACGAAGC TTCATGGTCT GAAATCCAAG
TTAAATGAGT CTGGTATTCA GGCGCATAAG TTTGGTGAAG CACAACGTCA GATCAAGCGT
GATATTACGG CTGCGAACGC TGCACTGGAT AAGCAGAAAG CCAAGCTGAA ATCGGTGCAG
GCTGCATCTG CAAAGATTGA GTCGAATAAG ATGGCTCGCT CTGAATTAGG GGGTGAGGCG
TTAGATTTGG CAATGAAAGG TGCTGTTCTG GCAGTGCCGA TTAAGTTTGC TGTCGATTTC
GAATCAGCGT TTGCTGATGT GAAAAAAGCG GTGAATGATG CCAGTGATGA AGAGCTGGAG
GTGATGAAGA AAAGGATCGT TATTGAGGCG CCTAAATTGG GTGTTACTCA AGAAGGTCTT
TCTGCGATTA TTGCCGAGGG TGCTCGTAAC GGCATCGCAA AAGATGAGTT GTTTAACTTT
GCTGAGTCAG CAGCAAAGAT GTCTGTTGCC TTTGATATGG CCGCCGATGA AGCTGGCGCG
TCAATGATGA AATGGCGCAC GACGATGAAT CTTAGTCAGG ATCAAGCGGT TAATCTGGCG
AATGCGGTGA ACTATGTTGG TGACAACATG GCAACCACGG CAAAAGACAT CACCGAAGTG
CTGGTTCGTC AGGGTGCAGT GATCACCAAT GCAGGTCTTG ATGAGGTTCA AGCGGCCTCA
CTATCAGCAG CAGTGTTGTC CGGTTCAGCA AGTACAGAAA TCGCGGCTAC CGCGACAAAG
AATTTGTTGC TGAGTTTAAC GGCTGGCGAT TCAGCGAGTG GTGGTCAGAA AGATGCGTTA
ATGACCTTGG GATTTGACCC AGCCGATTTA GCGCGAGACA TGCAGGAAAA CGCACCTAAG
ACGGTAGAGC AGGTGCTCTT GGCAATTAAA GACCAAGATG CCGACGTTCA AACCGCCTTG
ATGAAGAACC TATTCGGTTC TGAGTCTATC GGTTCAATCG CGCCACTTTT GCAAAACCTT
GATAACTTCC GTAAAGCATT CAAGTTAGTA GAGAAAGATA CCAACTTTGC AGGCTCTATG
CAGAACGAGT TTGAGGTTCA GTCTGCTACT GCCATGCGGA AAATATCAGC CTTTACTGCT
TCCATAACCG GACTGTTCAC CGTTTTAGGT GAAAGCATGC TGCCTGTTGT AGGTGATGTG
CTTGATACCA TAACGCCAGC AGTCACATGG TTAACAGAAG CAGCACAATC GGCACCAGGT
GCAACTGCTG CATTAATGGC TATTCCTGCT GCCTTGGTGG CTGTAAAAGG TGCAGCATTA
GCTTTTAAAG CAGGTAAGCT GTTACTTGGT CAGGGTAAGA ACTATGCCGA TTTAGGTAAA
GCTAAGCTTG GCATTGGTTT GGATGGTACT GCGGAATCGG CTCAGAAAGC GACGTCACGC
CTTTCTCGAT TGAATCAGAC ATTGGATAAC CTTGGTAACA ATGGGGGCCG TGGTCGCAAT
CGTTATCAAC GTGATGGTGC ATCTACTTCC AGTCGTCGTA AATCTCGTCC TAAAAGAGCA
AGATTATCGC GTCGTGGTGG TAAGTTTGGG CGTCTGCTTG ATTTTGGTAG TCGATTAACT
GACTTCCTTC CTATGGGTGC GCCAGCACCT GCCTTTGCGG CATCCTCTAA TGGGTCTGCA
AAAGGGAAAT GGGGCAAGCG AGCTGCTGTT CTTGGTGGTG GTACTGCGTT ATCAATGCTT
ACCTCAAGTG CTAATGCGGC TGATTTGGCT CTGATGGGAG CTGATGCGGC ATCTGTGGCA
TCTGTGGCAG GTGATGTGGC AGGTTCTTTG CCGTTAAAAG GCATGATGGC GGGTATTGCA
GGCACAGCAG GAAAACTATT CAAACCACTT AACGTCATGC TGCAGGGCGC GGCATTAACT
TCTGCGATCA ATAACGGTAG CGCTGAAGAA ATCGGAGGTA CTGCAGGTGA TATGGCAGGC
GGTTTGGGTG GTGCGGCATT AGGTGCAACG ATTGGTACCG CGATTTTACC TGGTATAGGT
ACGGTCGTAG GTGGTGCTCT TGGTGGTTTA GCCGGTGGCG AACTTGGCGA GTGGCTCGGG
ACGAAAGTTG CTGGTCTGTT TTCTAGTGAT GAAGAGGAAA CTCTGACTGC TAAAGCGGCA
ACGCTGGACA AAGAAAAAGA CGGATTAACT CAGCCTACTA GCCAGTTGCA AGCTGATGCT
GTGCTGAATG GTCCTGATGG CGGTTCAAGT TTGGCAATGT TACCCGAACC GACGAGTGTG
CTTCCGTCAC CGGATAGTAT TGCGAAGTCG CTTTCTCAGA CAAATCAAGA TAACCGCAAG
GTCGAAATTA ACTTAACTAT CCCACCATCC TCAAGCAATC CTCAACAGGA CGAGGATATG
CTGAATCGTT TGGTAGCTAA GTTGAAAGAT ATGATGATGG CTGAAGGCAT GATGGGTTCT
GGTTCGTTAT CAGTGGCTAT GGACGGTTCT CTTTCTGATA GGAGTGATGT ATGA
|
|---|
| Protein sequence | MSNQSKYQVA IAAIDQYSAP LKAASASFDS LTEDVKAQSA EIKKLNASAA SLNSYASIKR
DLTETSAQMG SAKVKAEQLA VATKELSLQT KGYESAVSSS QSKLQNLEAQ MRATEHPSKA
LRTAIKEARK EVKLNTANLN EHQLQLSKTQ AAYDKSRHEV SQLTKHYDVQ RTKLHGLKSK
LNESGIQAHK FGEAQRQIKR DITAANAALD KQKAKLKSVQ AASAKIESNK MARSELGGEA
LDLAMKGAVL AVPIKFAVDF ESAFADVKKA VNDASDEELE VMKKRIVIEA PKLGVTQEGL
SAIIAEGARN GIAKDELFNF AESAAKMSVA FDMAADEAGA SMMKWRTTMN LSQDQAVNLA
NAVNYVGDNM ATTAKDITEV LVRQGAVITN AGLDEVQAAS LSAAVLSGSA STEIAATATK
NLLLSLTAGD SASGGQKDAL MTLGFDPADL ARDMQENAPK TVEQVLLAIK DQDADVQTAL
MKNLFGSESI GSIAPLLQNL DNFRKAFKLV EKDTNFAGSM QNEFEVQSAT AMRKISAFTA
SITGLFTVLG ESMLPVVGDV LDTITPAVTW LTEAAQSAPG ATAALMAIPA ALVAVKGAAL
AFKAGKLLLG QGKNYADLGK AKLGIGLDGT AESAQKATSR LSRLNQTLDN LGNNGGRGRN
RYQRDGASTS SRRKSRPKRA RLSRRGGKFG RLLDFGSRLT DFLPMGAPAP AFAASSNGSA
KGKWGKRAAV LGGGTALSML TSSANAADLA LMGADAASVA SVAGDVAGSL PLKGMMAGIA
GTAGKLFKPL NVMLQGAALT SAINNGSAEE IGGTAGDMAG GLGGAALGAT IGTAILPGIG
TVVGGALGGL AGGELGEWLG TKVAGLFSSD EEETLTAKAA TLDKEKDGLT QPTSQLQADA
VLNGPDGGSS LAMLPEPTSV LPSPDSIAKS LSQTNQDNRK VEINLTIPPS SSNPQQDEDM
LNRLVAKLKD MMMAEGMMGS GSLSVAMDGS LSDRSDV
|
|---|
| |