14 homologs were found in PanDaTox collection
for query gene Shel_25930 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_25930  regulator of competence-specific genes  100 
 
 
99 aa  200  4e-51  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.650546 
 
 
-
 
NC_013165  Shel_09460  regulator of competence-specific genes  47.06 
 
 
103 aa  92  3e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0963603  normal 
 
 
-
 
NC_002967  TDE0549  TfoX domain-containing protein  46.53 
 
 
106 aa  89.4  1e-17  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_2174  TfoX domain protein  42.35 
 
 
124 aa  67.4  0.00000000007  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.598464  normal 
 
 
-
 
NC_008599  CFF8240_1817  TfoX domain-containing protein  35.05 
 
 
99 aa  63.2  0.000000001  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3473  regulator of competence-specific genes  35.78 
 
 
217 aa  57  0.00000008  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0078  TfoX domain-containing protein  42.11 
 
 
98 aa  53.9  0.0000007  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0081  TfoX domain-containing protein  42.11 
 
 
98 aa  53.9  0.0000007  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6951  TfoX-like protein  29.81 
 
 
107 aa  48.9  0.00002  Burkholderia sp. 383  Bacteria  normal  0.430219  normal  0.473379 
 
 
-
 
NC_008060  Bcen_1437  TfoX-like  32.38 
 
 
107 aa  48.9  0.00002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.636984  n/a   
 
 
-
 
NC_008544  Bcen2424_6391  TfoX domain-containing protein  32.38 
 
 
107 aa  48.9  0.00002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_7055  TfoX domain-containing protein  32.38 
 
 
107 aa  48.1  0.00004  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.845485  normal 
 
 
-
 
NC_008392  Bamb_5704  TfoX domain-containing protein  27.88 
 
 
120 aa  42.7  0.001  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0262  TfoX domain-containing protein  38.98 
 
 
140 aa  41.2  0.005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.249575  normal  0.24244 
 
 
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