Gene TDE0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0549 
Symbol 
ID2740537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp587087 
End bp587407 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content37% 
IMG OID637159421 
ProductTfoX domain-containing protein 
Protein accessionNP_971163 
Protein GI42526065 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAA GTAAAGAATA TTTGAATTTT ATTTTGAATC AGTTATCCGA ATTGGAAGAC 
ATAAGCTATA GAGCGATGAT GGGGGAATAT ATTTTATACT ACAAAGGTAA GATTGTCGGC
GGTATTTATG ATGACAGATT ACTTGTTAAA TCTGTAAAAT CGGCGATAGC CTATATGCCG
AATGCCGGCT ATGAGCTGCC GTATGACGGT GCAAAAGAAA TGCTCTTAGT TGATGATGTA
GACAGCAAAG ATTTTTTGAC AGGCTTATTT AAAACTATGT TTGATGAACT GCCTGCCCCA
AAACCTAAAA GGAGACGATA G
 
Protein sequence
MASSKEYLNF ILNQLSELED ISYRAMMGEY ILYYKGKIVG GIYDDRLLVK SVKSAIAYMP 
NAGYELPYDG AKEMLLVDDV DSKDFLTGLF KTMFDELPAP KPKRRR