Gene Bamb_5704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5704 
Symbol 
ID4314611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp154302 
End bp154664 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content61% 
IMG OID638153546 
ProductTfoX domain-containing protein 
Protein accessionYP_777585 
Protein GI115360448 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA GAACGGTTAT TCGGTCACGG AGTGGGTGGA TGGCATCGAG TCAGGGAACC 
GTCGATTTCA TCGTCGAGCA GATGGCCTTG GCCGGCACGG TGTCGGCCCG CAAGATGTTC
GGCGAATACG GAATCTACTG TGACGGCAAG ATGGTCGCGC TGGTGTGCGA CGACCGGTTG
TTCGTCAAGC CGACGTACGA CGGGCGTGCG TTTGTCGGTG CCTGTGACGA AGCTCCACCG
TATCCGGCAG CAAAACCGCA TCTCGTCATT GGAGGCGATC GCTGGGACGA CCGCGAATGG
CTGTCGACGC TGATCCGGAT CACCGCCGCG CAATTGCCGG TCCCGATGAA GCGAAGCCGA
TAG
 
Protein sequence
MTVRTVIRSR SGWMASSQGT VDFIVEQMAL AGTVSARKMF GEYGIYCDGK MVALVCDDRL 
FVKPTYDGRA FVGACDEAPP YPAAKPHLVI GGDRWDDREW LSTLIRITAA QLPVPMKRSR