| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2174 |
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| Symbol | |
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| ID | 6275779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2651945 |
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| End bp | 2652319 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642614234 |
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| Product | TfoX domain protein |
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| Protein accession | YP_001878762 |
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| Protein GI | 187736650 |
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| COG category | [K] Transcription |
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| COG ID | [COG3070] Regulator of competence-specific genes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.598464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAGAGT CCGTCATGGC CTCTTCCCCG GATGTAGTAG AATATATTTG TTTCCAGCTC
CGGCATGCCG GGGATATTTC CTTCAGAAAA ATGTTTGGGG ACTACGGATT GTACTGCGGC
CGGACATTCT TCGGTTTGGT GTGTGACAAC CAGTTGTATG TCAAGATAAC GGAGCCGGGT
TTGAAGATGT TTCCGCAACA GGAGCAGGGC TGCCCCTATC CCGGCGCCAG GCCGCATTTC
CTGGTGACGG AGCTGGACGA TGACCGGATC CTTTCCTCCC TTGTCAGGGA GACATGCTCC
GTTCTGGCTG TTCCGTCTGT TCTGGAGGGG AAGAAGAAAA AGGCGTCCGG TGAAAAAAGA
AGCAGGCGCC CTTAG
|
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| Protein sequence | MRESVMASSP DVVEYICFQL RHAGDISFRK MFGDYGLYCG RTFFGLVCDN QLYVKITEPG
LKMFPQQEQG CPYPGARPHF LVTELDDDRI LSSLVRETCS VLAVPSVLEG KKKKASGEKR
SRRP
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