Gene Shel_25930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25930 
Symbol 
ID8396481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2864374 
End bp2864673 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content59% 
IMG OID644987336 
Productregulator of competence-specific genes 
Protein accessionYP_003144947 
Protein GI257065275 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.650546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA GCCCCGAATA CCTGGAATTC GTTCTTGACC TGCTCAGAGA CGTTCCCGAC 
GTCACCCATA AGAAGATGAT GGGCGAATAC CTGCTCTACA GTCAGCGCAT CCTGTTCGGC
GGCGTGTACG ACGACCGCTT CCTGCTGAAG AGCACCGCCT CTGCGCGCGG CGCCTTCCCA
CAGGAGCAGA TTCCCTACGA CGGCGCCAGG CCCATGCAGC TTGTCGACAG CGAAGATTCT
GGCCGCATCG CCGAGGTCGT CGCCGACATG CTTAAAGAGC TGCCAAAGCC GAAGAAATAG
 
Protein sequence
MASSPEYLEF VLDLLRDVPD VTHKKMMGEY LLYSQRILFG GVYDDRFLLK STASARGAFP 
QEQIPYDGAR PMQLVDSEDS GRIAEVVADM LKELPKPKK