12 homologs were found in PanDaTox collection
for query gene Sden_0433 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007954  Sden_0433  Cro/CI family transcriptional regulator  100 
 
 		 51 aa  105  2e-22  Shewanella denitrificans OS217  Bacteria  normal  0.248324  n/a   
 
 
-
 
NC_007954  Sden_0427  transciptional regulator  87.23 
 
 		 82 aa  84  6e-16  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0669  transcriptional regulator, XRE family  72.34 
 
 		 78 aa  68.2  0.00000000003  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0705  Cro/CI family transcriptional regulator  70.21 
 
 		 97 aa  66.6  0.0000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0557  XRE family transcriptional regulator  70.21 
 
 		 78 aa  66.6  0.0000000001  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.948289 
 
 
-
 
NC_009665  Shew185_0649  XRE family transcriptional regulator  70.21 
 
 		 78 aa  66.2  0.0000000001  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0677  XRE family transcriptional regulator  70.21 
 
 		 78 aa  66.2  0.0000000001  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_3396  XRE family transcriptional regulator  70.21 
 
 		 97 aa  65.1  0.0000000003  Shewanella sp. MR-4  Bacteria  normal  1  hitchhiker  0.00158475 
 
 
-
 
NC_008345  Sfri_3656  transcriptional regulator, XRE family protein  71.11 
 
 		 78 aa  64.7  0.0000000005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0478  XRE family transcriptional regulator  67.39 
 
 		 78 aa  62  0.000000003  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0376  XRE family transcriptional regulator  55.1 
 
 		 82 aa  52  0.000003  Shewanella sediminis HAW-EB3  Bacteria  normal  1  unclonable  0.0000000000453716 
 
 
-
 
NC_010506  Swoo_4570  XRE family transcriptional regulator  55.1 
 
 		 82 aa  50.8  0.000005  Shewanella woodyi ATCC 51908  Bacteria  normal  1  unclonable  0.000000015798 
 
 
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