268 homologs were found in PanDaTox collection
for query gene Rpal_5079 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_0992  Acyl-CoA dehydrogenase-like  81.66 
 
 
408 aa  647    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.297365 
 
 
-
 
NC_007958  RPD_1095  acyl-CoA dehydrogenase-like  81.42 
 
 
408 aa  669    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5079  Acyl-CoA dehydrogenase type 2 domain  100 
 
 
409 aa  834    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4418  acyl-CoA dehydrogenase domain protein  66.23 
 
 
402 aa  480  1e-134  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.584473  n/a   
 
 
-
 
NC_010511  M446_3403  acyl-CoA dehydrogenase type 2  65.38 
 
 
409 aa  474  1e-132  Methylobacterium sp. 4-46  Bacteria  normal  0.0408106  normal  0.104533 
 
 
-
 
NC_010172  Mext_4597  acyl-CoA dehydrogenase domain-containing protein  62.98 
 
 
400 aa  464  1e-129  Methylobacterium extorquens PA1  Bacteria  normal  0.419077  normal  0.111113 
 
 
-
 
NC_011757  Mchl_5058  acyl-CoA dehydrogenase domain protein  62.98 
 
 
400 aa  463  1e-129  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.418777 
 
 
-
 
NC_012850  Rleg_4124  acyl-CoA dehydrogenase domain protein  48.95 
 
 
393 aa  353  2e-96  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.993047 
 
 
-
 
NC_011369  Rleg2_3795  acyl-CoA dehydrogenase domain protein  48.95 
 
 
393 aa  353  2.9999999999999997e-96  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00013086  normal  0.344818 
 
 
-
 
NC_009667  Oant_1476  acyl-CoA dehydrogenase protein  48.16 
 
 
390 aa  348  1e-94  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5361  putative acyl-CoA dehydrogenase  48.8 
 
 
402 aa  336  5e-91  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_6022  acyl-CoA dehydrogenase  47.49 
 
 
399 aa  336  5e-91  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5837  acyl-CoA dehydrogenase-like protein  48.62 
 
 
400 aa  333  2e-90  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0185  acyl-CoA dehydrogenase domain-containing protein  49.16 
 
 
387 aa  320  3e-86  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1718  acyl-CoA dehydrogenase domain protein  43.72 
 
 
428 aa  304  2.0000000000000002e-81  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2526  putative acyl-CoA dehydrogenase  44.08 
 
 
425 aa  298  1e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0280993 
 
 
-
 
NC_007651  BTH_I0531  acyl-CoA dehydrogenase domain-containing protein  45.38 
 
 
407 aa  295  9e-79  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0818  acyl-CoA dehydrogenase domain-containing protein  45.65 
 
 
407 aa  290  2e-77  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0641  acyl-CoA dehydrogenase domain-containing protein  45.65 
 
 
407 aa  290  2e-77  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0655  acyl-CoA dehydrogenase domain-containing protein  45.65 
 
 
407 aa  290  2e-77  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0042  acyl-CoA dehydrogenase domain-containing protein  45.38 
 
 
407 aa  289  7e-77  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2888  acyl-CoA dehydrogenase domain-containing protein  45.38 
 
 
407 aa  289  7e-77  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2197  acyl-CoA dehydrogenase domain-containing protein  45.38 
 
 
407 aa  289  7e-77  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2510  acyl-CoA dehydrogenase domain-containing protein  45.38 
 
 
407 aa  289  7e-77  Burkholderia mallei NCTC 10247  Bacteria  normal  0.10491  n/a   
 
 
-
 
NC_008061  Bcen_4153  Acyl-CoA dehydrogenase, type 2-like  43.17 
 
 
398 aa  286  4e-76  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.240401  n/a   
 
 
-
 
NC_010515  Bcenmc03_3304  acyl-CoA dehydrogenase type 2  43.17 
 
 
398 aa  286  4e-76  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.890764  normal 
 
 
-
 
NC_008543  Bcen2424_4213  acyl-CoA dehydrogenase type 2  43.17 
 
 
398 aa  286  4e-76  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.353379 
 
 
-
 
NC_010552  BamMC406_4110  acyl-CoA dehydrogenase type 2  42.47 
 
 
398 aa  285  1.0000000000000001e-75  Burkholderia ambifaria MC40-6  Bacteria  normal  0.163636  normal 
 
 
-
 
NC_007511  Bcep18194_B1805  Acyl-CoA dehydrogenase-like  42.62 
 
 
398 aa  284  2.0000000000000002e-75  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_008391  Bamb_3636  acyl-CoA dehydrogenase type 2  42.03 
 
 
398 aa  284  3.0000000000000004e-75  Burkholderia ambifaria AMMD  Bacteria  normal  0.556701  normal 
 
 
-
 
NC_010086  Bmul_4392  acyl-CoA dehydrogenase domain-containing protein  41.26 
 
 
398 aa  274  3e-72  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0166  putative carnitine operon oxidoreductase  38.75 
 
 
395 aa  255  1.0000000000000001e-66  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1077  acyl-CoA dehydrogenase domain protein  41.55 
 
 
385 aa  231  1e-59  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3056  acyl-CoA dehydrogenase domain-containing protein  34.34 
 
 
390 aa  160  5e-38  Salinispora arenicola CNS-205  Bacteria  normal  0.432663  hitchhiker  0.00291671 
 
 
-
 
NC_009380  Strop_0683  acyl-CoA dehydrogenase type 2  34.5 
 
 
385 aa  145  2e-33  Salinispora tropica CNB-440  Bacteria  normal  0.998366  normal 
 
 
-
 
NC_010338  Caul_2948  acyl-CoA dehydrogenase domain-containing protein  27.94 
 
 
416 aa  96.3  8e-19  Caulobacter sp. K31  Bacteria  normal  0.0471344  normal 
 
 
-
 
NC_014150  Bmur_2643  acyl-CoA dehydrogenase domain protein  24.28 
 
 
371 aa  83.6  0.000000000000006  Brachyspira murdochii DSM 12563  Bacteria  normal  0.475979  n/a   
 
 
-
 
NC_009485  BBta_4293  putative Acyl-CoA dehydrogenase  26.95 
 
 
398 aa  73.6  0.000000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  hitchhiker  0.004124 
 
 
-
 
NC_014165  Tbis_2091  acyl-CoA dehydrogenase domain-containing protein  27.89 
 
 
386 aa  69.3  0.0000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.0244674  normal  0.176746 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  26.24 
 
 
384 aa  69.3  0.0000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5885  acyl-CoA dehydrogenase domain-containing protein  24.61 
 
 
375 aa  69.3  0.0000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.468713 
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  29.3 
 
 
389 aa  68.2  0.0000000002  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  25.42 
 
 
382 aa  66.6  0.0000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_009565  TBFG_11696  acyl-CoA dehydrogenase fadE16  26.78 
 
 
373 aa  66.2  0.000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.392207 
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  25.07 
 
 
392 aa  65.9  0.000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  36.52 
 
 
382 aa  65.1  0.000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3306  Acyl-CoA dehydrogenase-like  25.89 
 
 
380 aa  64.3  0.000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1173  Acyl-CoA dehydrogenase type 2 domain protein  26.35 
 
 
383 aa  63.9  0.000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  30.81 
 
 
384 aa  63.9  0.000000005  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  26.59 
 
 
387 aa  63.9  0.000000005  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  26.64 
 
 
387 aa  63.5  0.000000007  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  26.11 
 
 
378 aa  62.8  0.00000001  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  30.54 
 
 
393 aa  62  0.00000002  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  26.94 
 
 
390 aa  61.2  0.00000003  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_011146  Gbem_3575  acyl-CoA dehydrogenase domain protein  24.56 
 
 
380 aa  60.8  0.00000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3413  acyl-CoA dehydrogenase domain protein  30.43 
 
 
385 aa  60.1  0.00000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.926635  normal  0.183052 
 
 
-
 
NC_008346  Swol_1483  butyryl-CoA dehydrogenase  28.42 
 
 
382 aa  60.1  0.00000008  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  23.51 
 
 
379 aa  59.7  0.00000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013131  Caci_0550  acyl-CoA dehydrogenase domain protein  34.83 
 
 
377 aa  59.3  0.0000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.193039  decreased coverage  0.00272664 
 
 
-
 
NC_009714  CHAB381_1168  putative acyl-coa dehydrogenase  23.01 
 
 
372 aa  59.7  0.0000001  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  29.77 
 
 
389 aa  59.7  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6843  acyl-CoA dehydrogenase domain-containing protein  23.36 
 
 
393 aa  58.5  0.0000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13303  acyl-CoA dehydrogenase fadE25  25 
 
 
389 aa  57.8  0.0000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  23.96 
 
 
386 aa  57  0.0000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_013743  Htur_1175  acyl-CoA dehydrogenase domain protein  22.97 
 
 
381 aa  56.6  0.0000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  24 
 
 
390 aa  56.6  0.0000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  22.07 
 
 
380 aa  56.6  0.0000007  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4180  acyl-CoA dehydrogenase domain protein  23.32 
 
 
383 aa  56.6  0.0000008  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  22.35 
 
 
387 aa  56.2  0.0000009  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  24.87 
 
 
380 aa  55.8  0.000001  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  27.65 
 
 
393 aa  55.8  0.000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  23.6 
 
 
381 aa  55.8  0.000001  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  24.02 
 
 
396 aa  56.2  0.000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_013440  Hoch_2948  acyl-CoA dehydrogenase domain protein  24.21 
 
 
391 aa  55.5  0.000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0163396  normal 
 
 
-
 
NC_007333  Tfu_1234  putative hydrolase  28.8 
 
 
370 aa  54.3  0.000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6601  Acyl-CoA dehydrogenase-like protein  27 
 
 
425 aa  54.7  0.000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0223249  normal  0.275726 
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  24.12 
 
 
387 aa  55.1  0.000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  23.46 
 
 
381 aa  54.3  0.000004  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1842  acyl-CoA dehydrogenase domain-containing protein  23.18 
 
 
387 aa  54.3  0.000004  Sphingomonas wittichii RW1  Bacteria  normal  0.982054  normal 
 
 
-
 
NC_014212  Mesil_0067  acyl-CoA dehydrogenase domain protein  27.95 
 
 
394 aa  54.3  0.000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  23.29 
 
 
381 aa  54.3  0.000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  23.92 
 
 
379 aa  54.3  0.000004  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  26.4 
 
 
388 aa  54.3  0.000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  25.06 
 
 
406 aa  53.9  0.000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_008146  Mmcs_1300  acyl-CoA dehydrogenase-like protein  24.4 
 
 
388 aa  53.5  0.000006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1317  acyl-CoA dehydrogenase domain-containing protein  24.4 
 
 
388 aa  53.5  0.000006  Mycobacterium sp. KMS  Bacteria  normal  normal  0.247959 
 
 
-
 
NC_012560  Avin_21570  Acyl-CoA dehydrogenase family protein  29.47 
 
 
400 aa  53.5  0.000006  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  21.66 
 
 
382 aa  53.5  0.000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_009077  Mjls_1336  acyl-CoA dehydrogenase domain-containing protein  24.4 
 
 
388 aa  53.5  0.000006  Mycobacterium sp. JLS  Bacteria  normal  0.11867  normal 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  30.77 
 
 
388 aa  53.5  0.000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_007492  Pfl01_0239  Acyl-CoA dehydrogenase-like  27.49 
 
 
397 aa  53.1  0.000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  23.31 
 
 
383 aa  53.1  0.000009  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009338  Mflv_0446  butyryl-CoA dehydrogenase  25.13 
 
 
385 aa  53.1  0.000009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.981915  normal 
 
 
-
 
NC_013744  Htur_4420  acyl-CoA dehydrogenase domain protein  29.19 
 
 
383 aa  52.8  0.00001  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.135113  n/a   
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  25.22 
 
 
417 aa  53.1  0.00001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  24.04 
 
 
383 aa  52.8  0.00001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
389 aa  52.8  0.00001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3188  acyl-CoA dehydrogenase type 2  21.15 
 
 
389 aa  51.6  0.00002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  32.46 
 
 
389 aa  51.6  0.00002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  24.35 
 
 
394 aa  52  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
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