9 homologs were found in PanDaTox collection
for query gene RPC_3006 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_3006  putative general secretion pathway protein H precursor  100 
 
 		 139 aa  275  2e-73  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.303532 
 
 
-
 
NC_007964  Nham_0738  general secretion pathway protein H  59.42 
 
 		 157 aa  169  1e-41  Nitrobacter hamburgensis X14  Bacteria  normal  0.607595  n/a   
 
 
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NC_009485  BBta_2614  putative general secretion pathway protein H  59.56 
 
 		 142 aa  142  1e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_1281  putative general secretion pathway protein H, GspH  49.26 
 
 		 154 aa  129  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_2110  putative general secretion pathway protein H precursor  62.07 
 
 		 163 aa  128  3e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0128014  normal  1 
 
 
-
 
NC_011666  Msil_0913  general secretion pathway protein H  50.72 
 
 		 153 aa  125  2.0000000000000002e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  0.519462 
 
 
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NC_002977  MCA1117  general secretion pathway protein H  28.47 
 
 		 141 aa  49.3  0.00002  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
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NC_007484  Noc_2892  general secretion pathway protein H  31.78 
 
 		 169 aa  48.5  0.00003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.229929  n/a   
 
 
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NC_010581  Bind_1583  putative general secretion pathway protein H precursor  32.33 
 
 		 161 aa  48.9  0.00003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.0931291 
 
 
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