| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2892 |
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| Symbol | |
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| ID | 3707446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3270156 |
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| End bp | 3270665 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637739368 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_344868 |
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| Protein GI | 77166343 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain
[TIGR02596] Verrucomicrobium spinosum paralogous family TIGR02596 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.229929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGA AGAGGTCTTC CGCTCTCCTC TTCCAGCGGG AGGGGAGCGC CTCCCGGGGA
CTTTTTCGGC ACCAGCCCCA GCGCGCATTT ACCCTGCTTG AATTGCTGGT CGTTTTGGCT
CTTGCAGCAA TATTGATGGC GTTGGTACCG CCTTTATTGC AGGGAGGCGT TGCCAACGCC
GAGTTGAAAA GCACCGCTCG GAAATTGGCG GCGGCCCTAA AATACGTTCG CAGCCAAGCC
ATTACTCACC ACCAGGAAGC CGTTTTGGTA GTGGATTTAG AGCGCCGCTA TTTTATGATT
ACCGGCAAAA AGCGCCGATA TCCAATTCCA GATAATCTGG AAATCTCCCT CGTTACCGCC
CGTTCCGAGC TGGATAGCGA TCATATCGGC AAAATCCGCT TCTTCCCCGA TGGCACTTCC
ACCGGTGGTC GCATTACTGT TGCCCAGGGC AAGAGCAAAT ATGGGGTTGA TGTCAATTGG
CTGACGGGTC AGGTGGCCAT TCTTGATTAG
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| Protein sequence | MAVKRSSALL FQREGSASRG LFRHQPQRAF TLLELLVVLA LAAILMALVP PLLQGGVANA
ELKSTARKLA AALKYVRSQA ITHHQEAVLV VDLERRYFMI TGKKRRYPIP DNLEISLVTA
RSELDSDHIG KIRFFPDGTS TGGRITVAQG KSKYGVDVNW LTGQVAILD
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