Gene RPC_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3006 
Symbol 
ID3973613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3301468 
End bp3301887 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID637926117 
Productputative general secretion pathway protein H precursor 
Protein accessionYP_532870 
Protein GI90424500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.303532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTGCG TGCTTGCCAT GGTGGCGTTG CTTGCGGCGA TCCTGCTGCC GCGTTCGCCG 
ACGACGACGT CGCGGCCGCG ATTGCTGGCC TATGCGGTCG AACTCGGAGC TCTGCTCAAG
GCCGACCGCA ACGCGGCGCT TTGGCGCCGC GGTGCGGTCG CCGCCGTGGT CGATGCGCCC
GGGCGAATGG TCAGGTCCGG GTCGACTGAT CGCGTAGTGC GTGTTCCGGA CGACGTCGAC
TTCGATGCGC TACTGCCGAA GCGCTGCAAC GGCCGCATGG CGCTGTCGTC GATCAGCTTC
TTCGGCAGCG GAATGTCCTG CGGCGGCACG ATACGGCTGA CGCGGTTCGG CAGCGGGTAC
GAGGTGCGGG TCAATTGGCT GACGGGGGGC GTCGACATTG TCGCGCAGGA TACGTTCTGA
 
Protein sequence
MVCVLAMVAL LAAILLPRSP TTTSRPRLLA YAVELGALLK ADRNAALWRR GAVAAVVDAP 
GRMVRSGSTD RVVRVPDDVD FDALLPKRCN GRMALSSISF FGSGMSCGGT IRLTRFGSGY
EVRVNWLTGG VDIVAQDTF