| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0913 |
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| Symbol | |
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| ID | 7093348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 1000978 |
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| End bp | 1001439 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643464253 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_002361245 |
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| Protein GI | 217977098 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.519462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTCAC GACGCGGTCA AGGCGGCTTC ACTTTGCTTG AGACGGTCTG CGTGCTCGCC
ATCATCGCGA TCCTCGCGGC GCTTGTGATG CCGGCCTTTC CGCGCGGCAC CTCGCCGGCC
CAGCTTCAGG CGCTGGCGAT GGCGACGGCG ACCATTCTCA AGGCCGACCG CAATGCCGCT
ATGCGCCGCG GCGCGCCGGT CTCGACCGAA ATCGATACGG CGGGGCGCGT CATCCGCTCT
GGCGCCAGTC AAAATCGCGT TATCGTGCCG GAGGACGTCA ATTTCAGCGC CATGCTGGCG
GACACCTGCG ATCAGCGCGC CGGCGGCACG ACGATCTCCT TCTTCGCGTC CGGATTGTCC
TGCGGCGGCG CGCTCTCCCT GTCGCGGCTG GGCGAGACCC TCGAAGTACG CGTCGCCTGG
CTCACCGGAG GCGTCGAAAT TGTGCCCCAG AAAACCTTTT GA
|
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| Protein sequence | MNSRRGQGGF TLLETVCVLA IIAILAALVM PAFPRGTSPA QLQALAMATA TILKADRNAA
MRRGAPVSTE IDTAGRVIRS GASQNRVIVP EDVNFSAMLA DTCDQRAGGT TISFFASGLS
CGGALSLSRL GETLEVRVAW LTGGVEIVPQ KTF
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