9 homologs were found in PanDaTox collection
for query gene PSPTO_4594 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_4594  type III effector HopO1-2  100 
 
 		 298 aa  615  1e-175  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.976788  n/a   
 
 
-
 
NC_004633  PSPTOA0018  type III effector HopO1-1  82.54 
 
 		 283 aa  434  1e-120  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0402217  n/a   
 
 
-
 
NC_004578  PSPTO_4592  type III effector HopO1-3  63.25 
 
 		 168 aa  199  6e-50  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00199473  n/a   
 
 
-
 
NC_009720  Xaut_3706  hypothetical protein  28.75 
 
 		 623 aa  65.1  0.000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_3017  PAAR repeat-containing protein  26.52 
 
 		 444 aa  50.4  0.00003  Serratia proteamaculans 568  Bacteria  normal  0.501568  normal  1 
 
 
-
 
NC_004578  PSPTO_4595  hypothetical protein  38.46 
 
 		 129 aa  45.8  0.0008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.139701  n/a   
 
 
-
 
NC_010322  PputGB1_2762  hypothetical protein  32.17 
 
 		 495 aa  43.5  0.005  Pseudomonas putida GB-1  Bacteria  normal  0.517827  normal  0.443449 
 
 
-
 
NC_011312  VSAL_I0882  hypothetical protein  26.99 
 
 		 251 aa  43.1  0.006  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0272  hypothetical protein  24.86 
 
 		 537 aa  43.1  0.006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
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