3 homologs were found in PanDaTox collection
for query gene PSPTO_4592 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_4592  type III effector HopO1-3  100 
 
 		 168 aa  345  2e-94  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00199473  n/a   
 
 
-
 
NC_004578  PSPTO_4594  type III effector HopO1-2  63.25 
 
 		 298 aa  206  1e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.976788  n/a   
 
 
-
 
NC_004633  PSPTOA0018  type III effector HopO1-1  58.47 
 
 		 283 aa  138  3.9999999999999997e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0402217  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>