| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTOA0018 |
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| Symbol | hopO1-1 |
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| ID | 1187367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004633 |
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| Strand | + |
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| Start bp | 20399 |
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| End bp | 21250 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637408352 |
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| Product | type III effector HopO1-1 |
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| Protein accession | NP_808677 |
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| Protein GI | 29171493 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 0.0402217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAATA TTTGTGGTAC TTCTGGCTCC AATCATGTGT ATAGTCCGCC TATTAGCCCT
CAACATGCAT CTGGTTCGTC CACACCAGTG CCCAGTGCTT CTGGGACGAT GCTTTCTCTC
AGTCATGAAC AAATATTAAG CCAGAACTAT GCTAGCAATA TAAAGGGGAA ATATCGCACG
AACCCCCGAA AAGGACCATC TCCTAGGCTT TCTGATACGC TGATGAAGCA GGCGCTGTCT
TCAGTGATCA CACAAGAGAA AAAGCGACTT AAAAGTCAAC CAAAGTCAAT AGCCCAAGAT
ATTCAGCCTC CAAACAGCAT GATCAAAAAT GCACTTGATG AAAAAGACAG CCACCCTTTT
GGTGATTGCT TTTCAGACGA TGAATTTCTT GCGATCCATC TCTATACGAG TTGTCTTTAC
AGACCGATCA ACCATCATCT GCGGTATGCC CCGAAAAATG ATGTCGCGCC TGTTGTCGAG
GCAATGAATA GCGGTTTGGC CAAACTTGCT CAATACCCTG ATTATCAGGT GTCTGGTCAG
CTGCATAGAG GCATCAAGCA AAAGATGGAT GATGGTGAAG TTATGAGTCG CTTCAAGCCG
GGTAATACTT ATCGTGATGA CGCGTTCATG AGCACATCGA CTAGAATGGA TGTTACAGAA
GAATTTACTT CCGATGTCAC GTTACATCTG CAGTCCTCAT CAGCCGTCAA TATAGGTCCC
TTTTCAAAAA ACCCATACGA GGACGAAGCG CTCATCCCGC CCCTGACGCC TTTCAAAGTA
ACCGGTCTGC ACAAGCAGGA CGATAGGTGG CACGTCCACT TGAACGAGAT CGCAGAGAGC
TCTGACGAGT GA
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| Protein sequence | MGNICGTSGS NHVYSPPISP QHASGSSTPV PSASGTMLSL SHEQILSQNY ASNIKGKYRT
NPRKGPSPRL SDTLMKQALS SVITQEKKRL KSQPKSIAQD IQPPNSMIKN ALDEKDSHPF
GDCFSDDEFL AIHLYTSCLY RPINHHLRYA PKNDVAPVVE AMNSGLAKLA QYPDYQVSGQ
LHRGIKQKMD DGEVMSRFKP GNTYRDDAFM STSTRMDVTE EFTSDVTLHL QSSSAVNIGP
FSKNPYEDEA LIPPLTPFKV TGLHKQDDRW HVHLNEIAES SDE
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