More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_1790 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1790  acyl-CoA dehydrogenase family protein  100 
 
 
397 aa  810    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  84.89 
 
 
393 aa  685    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  71.78 
 
 
378 aa  544  1e-153  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  71.59 
 
 
380 aa  534  1e-150  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_012560  Avin_21570  Acyl-CoA dehydrogenase family protein  66.84 
 
 
400 aa  520  1e-146  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_31100  Acyl-CoA dehydrogenase family protein  59.39 
 
 
396 aa  470  1.0000000000000001e-131  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  60.11 
 
 
390 aa  451  1.0000000000000001e-126  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  57.14 
 
 
388 aa  419  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0523  acyl-CoA dehydrogenase type 2  52.3 
 
 
407 aa  404  1e-111  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3873  Acyl-CoA dehydrogenase type 2 domain protein  53.12 
 
 
411 aa  393  1e-108  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_30500  putative acyl-CoA dehydrogenase  55.91 
 
 
383 aa  382  1e-105  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4462  Acyl-CoA dehydrogenase type 2 domain  48.26 
 
 
402 aa  377  1e-103  Ralstonia pickettii 12J  Bacteria  normal  normal  0.542965 
 
 
-
 
NC_012857  Rpic12D_4596  Acyl-CoA dehydrogenase type 2 domain protein  48.26 
 
 
402 aa  377  1e-103  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  53.5 
 
 
384 aa  372  1e-102  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_007973  Rmet_2217  Acyl-CoA dehydrogenase  50.77 
 
 
402 aa  370  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  0.0777616  normal  0.101595 
 
 
-
 
NC_010552  BamMC406_4154  acyl-CoA dehydrogenase domain-containing protein  48.72 
 
 
440 aa  355  8.999999999999999e-97  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.233252 
 
 
-
 
NC_007348  Reut_B5046  Acyl-CoA dehydrogenase, C-terminal  50.12 
 
 
402 aa  353  2e-96  Ralstonia eutropha JMP134  Bacteria  normal  0.721222  n/a   
 
 
-
 
NC_010515  Bcenmc03_3260  acyl-CoA dehydrogenase domain-containing protein  49.23 
 
 
459 aa  352  8e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3681  acyl-CoA dehydrogenase domain-containing protein  48.33 
 
 
442 aa  351  1e-95  Burkholderia ambifaria AMMD  Bacteria  normal  0.902105  normal 
 
 
-
 
NC_011666  Msil_2670  Acyl-CoA dehydrogenase type 2 domain protein  47.37 
 
 
389 aa  344  2e-93  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010086  Bmul_4333  acyl-CoA dehydrogenase type 2  49.74 
 
 
440 aa  343  4e-93  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.619225  normal  0.220534 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  47.61 
 
 
384 aa  340  2e-92  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1754  Acyl-CoA dehydrogenase  47.89 
 
 
454 aa  336  2.9999999999999997e-91  Burkholderia sp. 383  Bacteria  normal  normal  0.0688656 
 
 
-
 
NC_008061  Bcen_4109  Acyl-CoA dehydrogenase, type 2-like  50 
 
 
452 aa  336  3.9999999999999995e-91  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.381793  n/a   
 
 
-
 
NC_008543  Bcen2424_4257  acyl-CoA dehydrogenase type 2  50 
 
 
452 aa  336  3.9999999999999995e-91  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00125865  normal  0.295507 
 
 
-
 
NC_010725  Mpop_4897  acyl-CoA dehydrogenase domain protein  50 
 
 
381 aa  327  3e-88  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5139  putative acyl-CoA dehydrogenase  46.28 
 
 
399 aa  327  3e-88  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0630041 
 
 
-
 
NC_010172  Mext_1170  acyl-CoA dehydrogenase domain-containing protein  48.15 
 
 
381 aa  318  1e-85  Methylobacterium extorquens PA1  Bacteria  normal  0.665446  normal  0.0188326 
 
 
-
 
NC_011757  Mchl_1330  acyl-CoA dehydrogenase domain protein  48.41 
 
 
381 aa  313  2.9999999999999996e-84  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.135454  normal  0.523473 
 
 
-
 
NC_009485  BBta_3307  putative acyl-CoA dehydrogenase  45.79 
 
 
394 aa  313  3.9999999999999997e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  43.56 
 
 
382 aa  312  6.999999999999999e-84  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_009621  Smed_5653  acyl-CoA dehydrogenase type 2  43.8 
 
 
410 aa  311  2e-83  Sinorhizobium medicae WSM419  Bacteria  normal  0.329683  normal  0.865966 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  42.64 
 
 
406 aa  298  1e-79  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_009485  BBta_2584  putative acyl-CoA dehydrogenase  41.98 
 
 
398 aa  285  1.0000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0375347 
 
 
-
 
NC_010505  Mrad2831_4840  acyl-CoA dehydrogenase type 2  48.54 
 
 
381 aa  273  5.000000000000001e-72  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.910203 
 
 
-
 
NC_009921  Franean1_2020  acyl-CoA dehydrogenase type 2  39.39 
 
 
394 aa  263  4e-69  Frankia sp. EAN1pec  Bacteria  normal  0.692035  normal  0.294025 
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  39.3 
 
 
393 aa  259  7e-68  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_011981  Avi_7179  acyl-CoA dehydrogenase  40.16 
 
 
394 aa  247  3e-64  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0478  acyl-CoA dehydrogenase domain-containing protein  37.9 
 
 
396 aa  228  1e-58  Roseiflexus sp. RS-1  Bacteria  normal  0.859047  normal 
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
394 aa  221  9.999999999999999e-57  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2419  Acyl-CoA dehydrogenase  38.59 
 
 
332 aa  216  5.9999999999999996e-55  Frankia sp. CcI3  Bacteria  normal  0.238624  normal  0.291589 
 
 
-
 
NC_009921  Franean1_3756  acyl-CoA dehydrogenase type 2  34.75 
 
 
418 aa  215  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  0.326681  normal 
 
 
-
 
NC_013093  Amir_4313  acyl-CoA dehydrogenase type 2 domain protein  36.34 
 
 
397 aa  215  9.999999999999999e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  32.38 
 
 
390 aa  212  7.999999999999999e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  34.58 
 
 
398 aa  191  2e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2310  acyl-CoA dehydrogenase type 2  30.45 
 
 
384 aa  191  2e-47  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.154104  n/a   
 
 
-
 
NC_009632  SaurJH1_2352  acyl-CoA dehydrogenase type 2  30.45 
 
 
384 aa  191  2e-47  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.657423  n/a   
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  30.59 
 
 
381 aa  184  3e-45  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  31.1 
 
 
382 aa  180  4e-44  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_011772  BCG9842_B2142  putative acyl-CoA dehydrogenase, short-chain specific  31.1 
 
 
382 aa  176  6e-43  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK2818  acyl-CoA dehydrogenase, short-chain specific  31.1 
 
 
382 aa  174  1.9999999999999998e-42  Bacillus cereus E33L  Bacteria  normal  0.149479  n/a   
 
 
-
 
NC_011658  BCAH187_A3128  putative acyl-CoA dehydrogenase, short-chain specific  31.1 
 
 
382 aa  174  1.9999999999999998e-42  Bacillus cereus AH187  Bacteria  hitchhiker  0.000407188  n/a   
 
 
-
 
NC_005945  BAS2889  acyl-CoA dehydrogenase, short-chain specific  31.1 
 
 
382 aa  174  3.9999999999999995e-42  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00742766  n/a   
 
 
-
 
NC_007530  GBAA_3105  acyl-CoA dehydrogenase, short-chain specific  31.1 
 
 
382 aa  174  3.9999999999999995e-42  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.362062  n/a   
 
 
-
 
NC_011725  BCB4264_A3094  putative acyl-CoA dehydrogenase, short-chain specific  30.56 
 
 
382 aa  172  9e-42  Bacillus cereus B4264  Bacteria  normal  0.952201  n/a   
 
 
-
 
NC_011773  BCAH820_3109  putative acyl-CoA dehydrogenase, short-chain specific  30.83 
 
 
382 aa  172  1e-41  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_3126  acyl-CoA dehydrogenase, short-chain specific, putative  31.37 
 
 
382 aa  171  2e-41  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00757934  n/a   
 
 
-
 
NC_005957  BT9727_2857  acyl-CoA dehydrogenase, short-chain specific  30.83 
 
 
382 aa  171  3e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.25076  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  31.38 
 
 
387 aa  158  2e-37  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2066  acyl-CoA dehydrogenase type 2  29.34 
 
 
384 aa  155  2e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.335702  n/a   
 
 
-
 
NC_009972  Haur_2304  acyl-CoA dehydrogenase type 2  31.66 
 
 
392 aa  141  1.9999999999999998e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0799931  n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  30.42 
 
 
392 aa  137  4e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_1231  Acyl-CoA dehydrogenase, type 2-like protein  32.26 
 
 
384 aa  125  2e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.279686  normal 
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  27.15 
 
 
389 aa  110  5e-23  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_010322  PputGB1_3342  acyl-CoA dehydrogenase type 2  26.14 
 
 
410 aa  102  1e-20  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  27.17 
 
 
377 aa  102  1e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_014212  Mesil_1085  acyl-CoA dehydrogenase domain protein  26.58 
 
 
373 aa  102  2e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  0.863384  normal 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  27.3 
 
 
382 aa  99.8  8e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  27.3 
 
 
396 aa  99.8  8e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  23.61 
 
 
381 aa  99.4  1e-19  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4064  acyl-CoA dehydrogenase domain-containing protein  28.43 
 
 
424 aa  98.2  3e-19  Pseudomonas putida KT2440  Bacteria  normal  0.322511  hitchhiker  0.0046695 
 
 
-
 
NC_007953  Bxe_C0109  putative acyl-CoA dehydrogenase  30.03 
 
 
410 aa  97.4  4e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3662  acyl-CoA dehydrogenase domain-containing protein  28.46 
 
 
387 aa  96.7  7e-19  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000000131881 
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  28.07 
 
 
387 aa  96.3  9e-19  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_009512  Pput_1777  acyl-CoA dehydrogenase domain-containing protein  28.46 
 
 
387 aa  95.5  1e-18  Pseudomonas putida F1  Bacteria  normal  normal  0.0186488 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  27.69 
 
 
386 aa  95.9  1e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_010581  Bind_1853  acyl-CoA dehydrogenase type 2  25.82 
 
 
416 aa  95.1  2e-18  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1812  acyl-CoA dehydrogenase domain-containing protein  28.46 
 
 
387 aa  95.5  2e-18  Pseudomonas putida W619  Bacteria  normal  0.0871457  normal  0.415388 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  24.79 
 
 
380 aa  95.1  2e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  27.01 
 
 
387 aa  94.7  3e-18  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  27.1 
 
 
382 aa  94  5e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1645  isovaleryl-CoA dehydrogenase  26.42 
 
 
387 aa  93.2  7e-18  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1859  acyl-CoA dehydrogenase domain protein  25.73 
 
 
379 aa  93.2  7e-18  Eggerthella lenta DSM 2243  Bacteria  normal  0.61075  normal  0.652799 
 
 
-
 
NC_007492  Pfl01_3656  isovaleryl-CoA dehydrogenase  27.44 
 
 
387 aa  92  1e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.179163  normal  0.0293073 
 
 
-
 
NC_014158  Tpau_1370  Acyl-CoA dehydrogenase type 2 domain protein  33.07 
 
 
395 aa  92.4  1e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6843  acyl-CoA dehydrogenase domain-containing protein  26.18 
 
 
393 aa  92.4  1e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  24.19 
 
 
379 aa  92.8  1e-17  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  24.19 
 
 
379 aa  92.8  1e-17  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  24.65 
 
 
380 aa  91.3  2e-17  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2826  acyl-CoA dehydrogenase domain protein  26.3 
 
 
385 aa  90.9  3e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2470  isovaleryl-CoA dehydrogenase  27.25 
 
 
387 aa  91.3  3e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0293728  normal  0.0125727 
 
 
-
 
NC_008009  Acid345_1131  butyryl-CoA dehydrogenase  23.28 
 
 
392 aa  91.3  3e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.00519609  hitchhiker  0.000110962 
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  26.05 
 
 
379 aa  90.5  4e-17  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  26.05 
 
 
379 aa  90.5  4e-17  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3306  Acyl-CoA dehydrogenase-like  25.74 
 
 
380 aa  90.9  4e-17  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5062  acyl-CoA dehydrogenase domain protein  28.99 
 
 
387 aa  90.9  4e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.721342  normal 
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  24.86 
 
 
379 aa  90.1  5e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  26.05 
 
 
379 aa  90.1  6e-17  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6601  Acyl-CoA dehydrogenase-like protein  27.35 
 
 
425 aa  90.1  6e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0223249  normal  0.275726 
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  26.05 
 
 
379 aa  90.1  6e-17  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
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