8 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_15354 on replicon NC_011687
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011687  PHATRDRAFT_15354  predicted protein  100 
 
 
300 aa  619  1e-176  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.267179  n/a   
 
 
-
 
NC_006687  CNE01200  rRNA processing-related protein, putative  37.99 
 
 
1484 aa  207  2e-52  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009044  PICST_83216  Part of small ribosomal subunit (SSU) processosome (contains U3 snoRNA)  37.63 
 
 
1699 aa  198  7.999999999999999e-50  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.0841775  normal 
 
 
-
 
NC_009364  OSTLU_38035  predicted protein  36.45 
 
 
1869 aa  192  4e-48  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0179427  normal 
 
 
-
 
BN001307  ANIA_02147  rRNA biogenesis protein RRP5, putative (AFU_orthologue; AFUA_2G16040)  37.68 
 
 
1780 aa  183  3e-45  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0471871  normal  0.489753 
 
 
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NC_009356  OSTLU_36244  predicted protein  24.91 
 
 
696 aa  66.2  0.0000000006  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
BN001308  ANIA_01259  Pre-mRNA-splicing factor clf1 [Source:UniProtKB/Swiss-Prot;Acc:Q5BDX1]  23.21 
 
 
673 aa  58.2  0.0000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.588968  normal  0.14932 
 
 
-
 
NC_006670  CNA06730  RNA splicing-related protein, putative  26.5 
 
 
726 aa  42.7  0.007  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.525366  n/a   
 
 
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