| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE01200 |
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| Symbol | |
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| ID | 3257674 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006687 |
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| Strand | - |
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| Start bp | 330365 |
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| End bp | 335222 |
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| Gene Length | 4858 bp |
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| Protein Length | 1484 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638256708 |
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| Product | rRNA processing-related protein, putative |
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| Protein accession | XP_570705 |
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| Protein GI | 58267098 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGA AGAAGGACTC TCAAGTATCC AAAGATAAAT CCTCCAAAAA GACGCAAAAC
GAGAGCTCAT CAACAGCTCC CAGACCAGCC CCAGCCTTCA CATCGACTCT CCAAAACGAT
GAGACCGACT TTCCTCGAGG CGGCGGTTCC AGTTTGACAG CGTTCGAATT CAAACAAGTC
AGAGAAGAAG GAAGAAGAGA AGCTGAAAAT GAGGCCAAGC ACCAGGCTTC CAAGGGCGAG
AAGAGAAAAA GGCAGATGAG CGACAGACAA GCCAAGAGGT TGAAGAAGAA CGAAGATGCG
AAGAAGAAGG AGGAGCGGGA TAAGGACAAT ATTCGTGAGT ATTTCGTGGC GTTCTTCTGT
AGTATGGTAT GCTGACCTTG TGCAGGTGTC GAGATCCTCA ATTACAAGGT TCATTCTTTT
TCTCAAAAAG CTTCGTAGAT ATAAGTCACT GACGAACACT TAGCGATTAG TCCCTGGCAC
TCACGTCCTC GCTCGTGTCC ACACTATTTT GCCTCTCCAT CTTATTCTTT CCCTTCCCAA
TAACCTTCTC GCTCACGTAC CTATCACCGA GATCTCTAAC ACGTTAACCC AGCTTCTCAC
TGCCGAAGAA GCCATGGCTG TGGACGAAGG TGAAGAAGAA TCCGACGACG AGTCTTCCGC
ACCCGACCTT GCTCAGCTGT TTGTTCCTGG ACAATATGTC CATGCAAAGG TTCTTACTCT
TTACCCGACC GCTAGTCAGT CATTCATCTC TCAATACCCT ATCACGGAGA CCACCAAACT
CGCTTCTCGT GTGGAATTGA CTCTCATCCC TGAAAAAGTC AACTCAGAGG TTGCTAAAAA
GGATCTCGAG ACCGGCTACT TCCTGGTAGG TGAAGTTAAA TCTGAGGAAG ACAAGGGATG
GATAGTGGGT GTTGGCTTGA ATACTCAGGG CGGATCTTCC GTTGAAGGTT TCGTTTCTAA
AGACGAAGTG GCCAAATTTG TCCCCGCCCA GGCCCTCATC CCCGGTCAAC TCCTTCCCGC
CACCATCTCT TCTATTGCGG CTGGAGGCCG TGTTGCCCAC CTTTCCTTGA ACCAGCAAGA
TATCACTCGT TCACAGATCA GCGAAGTGTC CACTGTCGGT TCTATCGTTC CTGGCCACTC
AGTAAATGCT TTGATCACCG CGGTGGTTCC TTCTGGTTTG AATGTCAAAG TTGCTGGTTT
CTTCGACGGT ACTATCGACC TTGCTCATCT TCCTCTTGGA GAAGATGACA TTGAGAACAA
GTACAAGATC GGTAAGAAGA TCCGCGCTCG AGTCATATAT GATAATCTCG CCGCCAATCC
CCATTCTTTC GCTCTTTCAG CCCTTCCTCA TGTCTTGAAC TTTACCAGCC CTACCCAAGA
GGGCGACAAT ACTCCTCTCG AACTCGCTAT CCCCATCGGT AAAGTGTATC AAAGCGTTAA
GGTCACTAGG GTTTTAAATG ACTGGGGTGT CATGGTCAGG ACTCAGGATG GTTTGGAAGG
CTTTGTCCAT ATCAGCCACT TGGCCGATGA GCGTATCCCT GTGCTTTCTA ACGCCACCCC
TCAATTCAAA GCCGGTACCC TGCACCGAGC TCGTGTCATT GGTCACTCTC CCATGGATGG
TGTGCTTCTC CTCTCATTTG AACAATCTGT CCTTTCTCAA CTTTTCATGC AAGTCGACGA
GCTCAAGGTC GGTCAGCAAT TGAAGGGTAC TATTCGTCGA TTAACCGATA AGATGTTGTT
CGTCAACGTC CATGGCAATG TCGATGGTAT CGTTCACCCC ACTCATTACG CCGACATCAG
ATTGAAACAC CCCCAAAAAA GGTTTAAGCC AGAAGGTTCT GTCAAGGCTC GTGTTCTCTA
CCTCGAGCCC ACCAGGAACA GAGTTGTCTT AACTTTGAAA AAGACCTTCC TCGAGTCAGA
TTTGGCAGTC CCTCAGGGCT TTGAAGATCT GAAGGTTGGA GAAGTAACCC TTGGATCCGT
GTTGAAAATC GTCGATAAGG GTGTCATTGT AGAGTTGTTC GCTGGTTTGA AGGCCTTCAT
GCCCCATTCA GAGTGCAGGT ACGTCTACCT TGTACATTCA AACTACAAAT GCTGATATTT
TTTCTGTAGT CAAACTCACA TCAAAAATCT TTCTGAGGCG TTCTACATTG GCAAGCCCCT
CACCGTCCGT GTCATCACCG TGGACGCCTC TGCTTCTCGG ATTGTTGTCT CTGCCAAGCA
AGCTGCTCCT ACTGCACCCG CAACTGCTGC TGAGAAGCTT GAGGTTGGCG AGGCCGTCTC
TGGTACCGTC TCTCAAGTTC ACACTGAGCA AGTCGTCGTG AAGCTTGATG GCAACGGTTT
GACTGCATTG TTGAGTTTAA GCAACTTGAG TAACCAGAGG CATACAGGCA TTGAGGAGCT
CCGAAGAAGT CTCAAGGAAG GGGAGAAGAT TGATGACTTG GTTGTCGTGT CCAAGAATCC
CGTCTCTGGT TTGATCATTG TTAACATCAA GAAGACTATT ACTGCGAAGA AGGAGAAGGC
GAAGAAGGAG GACAAAGCTC CGTCTGGTAT TTCGGCGCAT GTCAAGGCTA TTGATGCAAT
TGAAGTTGGG CAGATCATCA CCGGAACCGT TCAAGAACAA ACTTCTCAGG GATACATGGT
CCAGCTTCCC AACAACCTTC GTGGCCGTGT CCACCCCTGC GACTCCTCTG ACGACCTCGC
CCTCGCCGCC GGCCATGGCC CTCTCACAGT TGGCGAAGAG GTCAAGTGTT ATGTGCTTGA
TGTCAATAGG TCTAAGCGCG CCATTGACCT CTCTACACGT CTTTCTCGAG TGCAAGGCAA
GGAAAACGTA GTTGACAGGG AAATCAACAC CGTGGATGAC TTAAAAGAAG GTGAGAGCGT
TAGAGGTTTG GTCAAGAACA TTGCTGGACA CGGAGTCTTT GTTTCTTTGG GAAGGAATGT
TACCGCGAGA ATCATGATCA AGGAACTCTT TGATGAAGTA AGCTAATACT GCTGTATTTC
AAAATGTTGT ACTAACGATT TAAACAGTAT GTCAAGGATT GGAAATCTCG TTTCGAAATC
AACCAACTCG TCTCTGGCAA GATTCTTTCC ATCAATCCCG GATCCAACTC TATCGAGATG
ACCCTCCGTA AAAACCCTTC AAAATCTGCG AAGAAGACCG CTTTGCTTTC TCTTTCCGAT
TTTGAAGAGG GTCAAAAAGT CGTTGCTGTT GTAAGGAAGG TCGAAGCTTA TGGGATGTTT
TTAAAGATCG AAGGTTCAAA CGTTAGTGGA TTGTGCCATA AGAGTGAAAT CACAGACAAC
AGGAAGGCGG ATGTTGCACA GGCCCTCAAG GGCTTCAGAG AGGGTGATCA GGTGAAGGCT
AAGATTGTCT CTATTGATAC GGAGAAGGGA AAGATCTCGT TCGGCATCAA GGCGAGCTAT
TTTGGTGAAG AGTTCGAAGG TGGAGAGAAG AGCGAAGACG AAGATGATGA GGTCGACGAA
GAGAATGATG AGCGGTTCAA TGAAGGGGAT CAAGAGATGG AAAGTGACGC CGGAGAATCG
GGAGAAGGAC AGGAACATGA GGATGAGGAG GCACTGGAAA TTGATGGAGG AGAAGAAGAG
GCAACGTCCG ACGAAGAAGA TAACGCCCCC CAGAACTTTA AGCCCGCTCC TAAAACTGCT
TTGAACCTTG GTGCCGGTTT CGATTGGACC GGTGAAGCTC CCGCTGCTGC CCCTGAATCA
GACGATGAGT CTGATTCTGA TGAAGAGGCT GTTGCTCCTG CCAAATCCAA GGGCAAATCA
AAAGCTGTTG ACCTTACTGC TACCGCTCCT TCTTCTAGGC CTTCATCCAC AGGAGAATAT
GAGCGTGCTC TCCTTGCTTC CCCCAATTCC TCCTTCCTCT GGATTCAGTA CATGTCTTTC
CACCTTCAGC TTCATGAGAT TGAGAAAGCA AGGAAAATTG GCAGGCAAGC TTTGGAGAAA
ATCTCGTACC GAGAAGAAGA GGAGAAACTG AATGTTTGGA TGGCCCTGAT CAATTTGGAG
ATCGCTTTCG GGACCGTGTC TGCAACTGAG AAGGTATTCG AAGAGGCGGC TCAATATAAC
GATAAACGGA CGGTGTACAT GCGATATGCT GAGGCTTTGC AAGTAGCCGG AAAGGATGAA
GTGAGTAGCA TATCTTATCA TAATCTTCTA TGTACCCTAG TTAACCATGT ATAGGCGCTT
GAGGAACTCT TCAAGAAGAT TGTCAAGAAG TTCTCTGCCT ACCCTGAATC CTGGACTCGT
TTTGCTGAAT TCTACCTCAA CAAAGGTGAT GTAGAAGCGG CTCGAGCACT TTTACCAAGG
AGCATGAAGT CGCTCGACAA GTCTAAGCGT GAGTGATTTT TTTTTCGAAA GAAATTGGGA
ACTTAATTGC TTGCAGATGT CGAGACCATC GAAAAAATGG CTCTCCTCGA ATTCAAGCAA
GGTGACGCAG AGCGAGGCAA GACTCTTTTC GAAGGGCTTG TTGACAGATT CCCCAAACGT
CTCGATCTCT GGGGTGTCTA TATCGATCAA GTTGCTAAAG TGGGAGATAT CCAAGGTGTG
AGAGGCTTGA TGGACAGAGC TCTTGAGCAA AAGTTGACTA GCAAGAAAGC CAAGTAAGTA
TCCCCCCACG ATATTGAAGA TTGGATGTTA ATGATAGCGC AGGTTCCTGT TCAAGAAGTG
GTTGACTATC GAACAGAGAA TAGGCGATGC GGCTGGTCAG GACAAGGCGA AAACAAGGGC
GAGAGAGTGG GTCGAAGCTA ATGCCAAGAA GCCTGCCCAA GATGAGGAAG AAGATAGTAA
TGATGAGGAA TAACCACTGA TGTTGAATAG ATTCATTGAT ATTGCTTTTC ATTTCCGG
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| Protein sequence | MAQKKDSQVS KDKSSKKTQN ESSSTAPRPA PAFTSTLQND ETDFPRGGGS SLTAFEFKQV
REEGRREAEN EAKHQASKGE KRKRQMSDRQ AKRLKKNEDA KKKEERDKDN IRVEILNYKR
LVPGTHVLAR VHTILPLHLI LSLPNNLLAH VPITEISNTL TQLLTAEEAM AVDEGEEESD
DESSAPDLAQ LFVPGQYVHA KVLTLYPTAS QSFISQYPIT ETTKLASRVE LTLIPEKVNS
EVAKKDLETG YFLVGEVKSE EDKGWIVGVG LNTQGGSSVE GFVSKDEVAK FVPAQALIPG
QLLPATISSI AAGGRVAHLS LNQQDITRSQ ISEVSTVGSI VPGHSVNALI TAVVPSGLNV
KVAGFFDGTI DLAHLPLGED DIENKYKIGK KIRARVIYDN LAANPHSFAL SALPHVLNFT
SPTQEGDNTP LELAIPIGKV YQSVKVTRVL NDWGVMVRTQ DGLEGFVHIS HLADERIPVL
SNATPQFKAG TLHRARVIGH SPMDGVLLLS FEQSVLSQLF MQVDELKVGQ QLKGTIRRLT
DKMLFVNVHG NVDGIVHPTH YADIRLKHPQ KRFKPEGSVK ARVLYLEPTR NRVVLTLKKT
FLESDLAVPQ GFEDLKVGEV TLGSVLKIVD KGVIVELFAG LKAFMPHSEC SQTHIKNLSE
AFYIGKPLTV RVITVDASAS RIVVSAKQAA PTAPATAAEK LEVGEAVSGT VSQVHTEQVV
VKLDGNGLTA LLSLSNLSNQ RHTGIEELRR SLKEGEKIDD LVVVSKNPVS GLIIVNIKKT
ITAKKEKAKK EDKAPSGISA HVKAIDAIEV GQIITGTVQE QTSQGYMVQL PNNLRGRVHP
CDSSDDLALA AGHGPLTVGE EVKCYVLDVN RSKRAIDLST RLSRVQGKEN VVDREINTVD
DLKEGESVRG LVKNIAGHGV FVSLGRNVTA RIMIKELFDE YVKDWKSRFE INQLVSGKIL
SINPGSNSIE MTLRKNPSKS AKKTALLSLS DFEEGQKVVA VVRKVEAYGM FLKIEGSNVS
GLCHKSEITD NRKADVAQAL KGFREGDQVK AKIVSIDTEK GKISFGIKAS YFGEEFEGGE
KSEDEDDEVD EENDERFNEG DQEMESDAGE SGEGQEHEDE EALEIDGGEE EATSDEEDNA
PQNFKPAPKT ALNLGAGFDW TGEAPAAAPE SDDESDSDEE AVAPAKSKGK SKAVDLTATA
PSSRPSSTGE YERALLASPN SSFLWIQYMS FHLQLHEIEK ARKIGRQALE KISYREEEEK
LNVWMALINL EIAFGTVSAT EKVFEEAAQY NDKRTVYMRY AEALQVAGKD EALEELFKKI
VKKFSAYPES WTRFAEFYLN KGDVEAARAL LPRSMKSLDK SKHVETIEKM ALLEFKQGDA
ERGKTLFEGL VDRFPKRLDL WGVYIDQVAK VGDIQGVRGL MDRALEQKLT SKKAKFLFKK
WLTIEQRIGD AAGQDKAKTR AREWVEANAK KPAQDEEEDS NDEE
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