28 homologs were found in PanDaTox collection
for query gene Mvan_4480 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008726  Mvan_4480  substrate-binding region of ABC-type glycine betaine transport system  100 
 
 		 273 aa  540  1e-153  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.112455  normal  0.149319 
 
 
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NC_009338  Mflv_2215  substrate-binding region of ABC-type glycine betaine transport system  76.76 
 
 		 241 aa  377  1e-103  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.356157 
 
 
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NC_008705  Mkms_4050  substrate-binding region of ABC-type glycine betaine transport system  59.33 
 
 		 276 aa  306  2.0000000000000002e-82  Mycobacterium sp. KMS  Bacteria  normal  0.537178  normal  1 
 
 
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NC_008146  Mmcs_3976  substrate-binding region of ABC-type glycine betaine transport system  59.33 
 
 		 276 aa  306  2.0000000000000002e-82  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
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NC_009077  Mjls_3990  substrate-binding region of ABC-type glycine betaine transport system  59.33 
 
 		 276 aa  306  2.0000000000000002e-82  Mycobacterium sp. JLS  Bacteria  normal  0.148982  normal  0.178954 
 
 
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NC_009565  TBFG_11270  lipoprotein lpqZ  56.23 
 
 		 286 aa  272  5.000000000000001e-72  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000341327  hitchhiker  0.00148817 
 
 
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NC_011886  Achl_2554  Substrate-binding region of ABC-type glycine betaine transport system  28.99 
 
 		 320 aa  94  3e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000921458 
 
 
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NC_008541  Arth_2839  substrate-binding region of ABC-type glycine betaine transport system  27.27 
 
 		 318 aa  92.8  6e-18  Arthrobacter sp. FB24  Bacteria  normal  0.0104087  n/a   
 
 
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NC_013235  Namu_1403  Substrate-binding region of ABC-type glycine betaine transport system  29.06 
 
 		 324 aa  84.7  0.000000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.619701  normal  0.504767 
 
 
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NC_013421  Pecwa_4556  Substrate-binding region of ABC-type glycine betaine transport system  28.27 
 
 		 293 aa  83.6  0.000000000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_013169  Ksed_26230  periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)  28.11 
 
 		 300 aa  82  0.00000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
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NC_009338  Mflv_1207  substrate-binding region of ABC-type glycine betaine transport system  28.03 
 
 		 316 aa  79  0.00000000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
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NC_008726  Mvan_5601  substrate-binding region of ABC-type glycine betaine transport system  27.37 
 
 		 316 aa  76.6  0.0000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
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NC_014158  Tpau_1208  Substrate-binding region of ABC-type glycine betaine transport system  31.34 
 
 		 299 aa  73.2  0.000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0243726  n/a   
 
 
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NC_013441  Gbro_1878  Substrate-binding region of ABC-type glycine betaine transport system  27.85 
 
 		 338 aa  72.4  0.000000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  0.200782  n/a   
 
 
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NC_013093  Amir_6268  Substrate-binding region of ABC-type glycine betaine transport system  28.85 
 
 		 294 aa  68.9  0.00000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_013174  Jden_2261  Substrate-binding region of ABC-type glycine betaine transport system  26.55 
 
 		 306 aa  67.4  0.0000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.989377  normal  0.378374 
 
 
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NC_014210  Ndas_0400  Substrate-binding region of ABC-type glycine betaine transport system  24.56 
 
 		 300 aa  64.7  0.000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
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NC_013510  Tcur_3633  Substrate-binding region of ABC-type glycine betaine transport system  26.64 
 
 		 303 aa  62.4  0.000000008  Thermomonospora curvata DSM 43183  Bacteria  normal  0.669788  n/a   
 
 
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NC_013595  Sros_8178  ABC transporter substrate binding protein (proline/glycine/betaine)  25.26 
 
 		 304 aa  59.7  0.00000005  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
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NC_011989  Avi_0504  ABC transporter substrate binding protein (proline/glycine/betaine)  26.84 
 
 		 304 aa  56.6  0.0000004  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
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NC_009664  Krad_1293  Substrate-binding region of ABC-type glycine betaine transport system  28.36 
 
 		 311 aa  55.1  0.000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
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NC_008705  Mkms_5055  substrate-binding region of ABC-type glycine betaine transport system  24.66 
 
 		 314 aa  55.1  0.000001  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
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NC_008146  Mmcs_4967  substrate-binding region of ABC-type glycine betaine transport system  24.66 
 
 		 314 aa  55.1  0.000001  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_5348  substrate-binding region of ABC-type glycine betaine transport system  24.66 
 
 		 314 aa  54.7  0.000002  Mycobacterium sp. JLS  Bacteria  normal  0.684846  normal  1 
 
 
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NC_013172  Bfae_30010  periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)  24.3 
 
 		 315 aa  48.1  0.0001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.107926  n/a   
 
 
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NC_013131  Caci_3084  Substrate-binding region of ABC-type glycine betaine transport system  25.46 
 
 		 302 aa  45.1  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.503055  normal  0.205604 
 
 
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NC_013131  Caci_3081  Substrate-binding region of ABC-type glycine betaine transport system  25 
 
 		 304 aa  42  0.01  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0356905 
 
 
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