| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3081 |
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| Symbol | |
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| ID | 8334433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3385549 |
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| End bp | 3386463 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644956228 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003113831 |
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| Protein GI | 256392267 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0356905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTC GCACCACAGG GTCCAATACT CGGGTCGTCG GCGCCGCACT GGCGGTCGCA
CTGGCGGCGA CCGGCGCGCT GAGCGCGTGC TCGTCGAGCT CCAAGAGCGG CTCCAAGGTC
GTCGTGGCCT CGGCCGCGTT CCCGGAGAAC GTGCTCCTGA TGGAGATCTA CGCGCAGGCA
CTGGAGGACA AGGGCATCTC GGTGGAGCGC AAACCCAACG TGGGACAGCG CGACGTGTTG
TTCCAGCAGT TGAAGTCGAA CGCGATCACG GTGGTCCCGG AGTACAACGG CGCCCTGCTG
GCCTACCTGG ACAAGTCCTC GACCGAGAGC ACCCAGTCCG GTGTGGACTC CGCGGTGACC
GCCAAGCTGC CGAGCAACCT GCAGATCCTG AACCCGGCCG CCGCCCAGGA CAACGACTCG
CTCGTGGTCA CCCAGGCGCT GGCGACCAAG GACAACCTGA AGAAGATCTC CGACCTCGCG
CCCTACGCCA AGGACCTGGT CCTGGGCTCG GCGCCGGAGT TCAAGACGCG CCAGCAGGGC
GTCCTGGGCC TGCAGAGCCA GTACGGGCTG ACCTTCAAGG ACTTCAAGGC GCTGGACAAC
TCCGGCCCGC AGACCGTCTC GGCGCTGCAG CACGGCGACG CCGACGTCGT CGACCTGTAC
AGCACCACCA CGGCGATCAA GACCAACGGC TTCGTGGTGC TCGACGACGA CAAGGGCCTG
TTCGGCGTGC AGAACGTGAT CCCGCTGGTG GACAAGGGCA AGCTGTCCCC GGCCGGCATC
GACGCGCTGA ACGCGGTGTC GGCGAAGCTG GACACGACCA CGCTGACCTC CCTGCTGGAG
CAGGTCGTCA CCCAGAAGAA GGACGAGTCG GACGTCGCCA AGGCGTGGCT GGCGTCGGTG
GGCCTGAACA AGTAA
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| Protein sequence | MRIRTTGSNT RVVGAALAVA LAATGALSAC SSSSKSGSKV VVASAAFPEN VLLMEIYAQA
LEDKGISVER KPNVGQRDVL FQQLKSNAIT VVPEYNGALL AYLDKSSTES TQSGVDSAVT
AKLPSNLQIL NPAAAQDNDS LVVTQALATK DNLKKISDLA PYAKDLVLGS APEFKTRQQG
VLGLQSQYGL TFKDFKALDN SGPQTVSALQ HGDADVVDLY STTTAIKTNG FVVLDDDKGL
FGVQNVIPLV DKGKLSPAGI DALNAVSAKL DTTTLTSLLE QVVTQKKDES DVAKAWLASV
GLNK
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