13 homologs were found in PanDaTox collection
for query gene Gmet_1339 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007517  Gmet_1339  AbrB family transcriptional regulator  100 
 
 		 89 aa  184  5e-46  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0175317 
 
 
-
 
NC_007484  Noc_2545  AbrB family transcriptional regulator  58.43 
 
 		 89 aa  114  6e-25  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2131  transcriptional regulator, AbrB family  51.22 
 
 		 87 aa  84.3  5e-16  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1918  transcriptional regulator, AbrB family  50 
 
 		 83 aa  79.7  0.00000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.170591  n/a   
 
 
-
 
NC_007413  Ava_3274  AbrB family transcriptional regulator  41.98 
 
 		 82 aa  79.3  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.146878 
 
 
-
 
NC_009483  Gura_3012  AbrB family transcriptional regulator  47.37 
 
 		 83 aa  76.6  0.0000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_3083  transcriptional regulator AbrB  40 
 
 		 91 aa  70.1  0.00000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_2743  transcriptional regulator, AbrB family  55.81 
 
 		 69 aa  51.2  0.000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.504039 
 
 
-
 
NC_011206  Lferr_1457  transcriptional regulator, AbrB family  56.1 
 
 		 70 aa  48.9  0.00003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.203506  normal  1 
 
 
-
 
NC_011761  AFE_1781  transcriptional regulator, AbrB family  56.1 
 
 		 70 aa  48.9  0.00003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.867819  n/a   
 
 
-
 
NC_013169  Ksed_24980  looped-hinge helix DNA binding domain, AbrB family  39.73 
 
 		 85 aa  45.8  0.0002  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010831  Cphamn1_1154  transcriptional regulator, AbrB family  30.77 
 
 		 89 aa  40.8  0.007  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.134363  normal  0.0192222 
 
 
-
 
NC_013169  Ksed_25030  looped-hinge helix DNA binding domain, AbrB family  33.8 
 
 		 79 aa  40.4  0.007  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
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