Gene Ksed_25030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25030 
Symbol 
ID8374006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2581196 
End bp2581435 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content73% 
IMG OID644992729 
Productlooped-hinge helix DNA binding domain, AbrB family 
Protein accessionYP_003150232 
Protein GI256826272 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family 


Plasmid Coverage information

Num covering plasmid clones100 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCA AGGGGCAGGT GACCGTGCCC AAGGAGGTGC GGGACGCCCT GCACCTGACC 
GCAGGGTCCC GTCTGGTCTT CGAGGCGACC GCCGATGGCG GTTACCTCGT GCGTGGAGTC
CGCGAGGCGG ATTCGCTCGC CGTGATGGCG GGGCGGCTGA GGCGGCGGGG GCCGGCGGTG
TCCCTGGTGC AGATGGACGG GGCCATCGCC TCCGGGGCGG CGGCAGGGCA GTCGGTGTGA
 
Protein sequence
MTSKGQVTVP KEVRDALHLT AGSRLVFEAT ADGGYLVRGV READSLAVMA GRLRRRGPAV 
SLVQMDGAIA SGAAAGQSV