More than 300 homologs were found in PanDaTox collection
for query gene Gbro_1806 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_2499  acyl-CoA dehydrogenase domain protein  79.61 
 
 
407 aa  637    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1806  acyl-CoA dehydrogenase domain protein  100 
 
 
407 aa  826    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2977  acyl-CoA dehydrogenase-like protein  68.45 
 
 
412 aa  561  1.0000000000000001e-159  Mycobacterium sp. MCS  Bacteria  normal  0.898877  n/a   
 
 
-
 
NC_008705  Mkms_3021  acyl-CoA dehydrogenase domain-containing protein  68.45 
 
 
412 aa  561  1.0000000000000001e-159  Mycobacterium sp. KMS  Bacteria  normal  normal  0.520443 
 
 
-
 
NC_009565  TBFG_12802  acyl-CoA dehydrogenase fadE21  68.22 
 
 
410 aa  555  1e-157  Mycobacterium tuberculosis F11  Bacteria  normal  0.234086  normal 
 
 
-
 
NC_009077  Mjls_2992  acyl-CoA dehydrogenase domain-containing protein  66.91 
 
 
415 aa  548  1e-155  Mycobacterium sp. JLS  Bacteria  normal  0.831286  normal  0.0331169 
 
 
-
 
NC_008726  Mvan_3323  acyl-CoA dehydrogenase domain-containing protein  65.62 
 
 
414 aa  543  1e-153  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.562649 
 
 
-
 
NC_009338  Mflv_3537  acyl-CoA dehydrogenase domain-containing protein  67.15 
 
 
413 aa  543  1e-153  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.195685  normal  0.254711 
 
 
-
 
NC_008726  Mvan_2342  acyl-CoA dehydrogenase domain-containing protein  66.91 
 
 
418 aa  535  1e-151  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.240439  decreased coverage  0.00232541 
 
 
-
 
NC_013510  Tcur_2337  acyl-CoA dehydrogenase domain protein  58.77 
 
 
397 aa  489  1e-137  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00222003  n/a   
 
 
-
 
NC_013440  Hoch_2622  acyl-CoA dehydrogenase domain protein  41.8 
 
 
431 aa  331  2e-89  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  36.95 
 
 
376 aa  229  7e-59  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  36.45 
 
 
376 aa  223  4.9999999999999996e-57  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  36.45 
 
 
376 aa  223  4.9999999999999996e-57  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  36.45 
 
 
381 aa  222  8e-57  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  36.45 
 
 
376 aa  222  9.999999999999999e-57  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.45 
 
 
376 aa  221  9.999999999999999e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  36.45 
 
 
376 aa  221  9.999999999999999e-57  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  36.45 
 
 
381 aa  222  9.999999999999999e-57  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  36.45 
 
 
381 aa  221  1.9999999999999999e-56  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  35.85 
 
 
379 aa  220  3e-56  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.45 
 
 
376 aa  219  5e-56  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  35.96 
 
 
376 aa  216  4e-55  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  36.7 
 
 
379 aa  214  1.9999999999999998e-54  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  35.78 
 
 
379 aa  214  1.9999999999999998e-54  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  35.78 
 
 
379 aa  214  2.9999999999999995e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  36.19 
 
 
402 aa  213  7e-54  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_007406  Nwi_3018  Acyl-CoA dehydrogenase  33.74 
 
 
407 aa  212  1e-53  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4263  acyl-CoA dehydrogenase-like  34.16 
 
 
390 aa  211  1e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.662141  normal  0.561312 
 
 
-
 
NC_007958  RPD_0356  isovaleryl-CoA dehydrogenase  34.15 
 
 
392 aa  212  1e-53  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.969667  decreased coverage  0.00000934354 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  33.66 
 
 
388 aa  211  2e-53  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  37.05 
 
 
380 aa  209  5e-53  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2318  acyl-CoA dehydrogenase domain-containing protein  34.81 
 
 
390 aa  209  5e-53  Methylobacterium sp. 4-46  Bacteria  normal  0.759089  normal  0.0223321 
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  34.47 
 
 
379 aa  209  9e-53  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  34.47 
 
 
379 aa  209  9e-53  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3396  acyl-CoA dehydrogenase  39.12 
 
 
351 aa  208  1e-52  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.581792  normal  0.0907936 
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  34.5 
 
 
381 aa  208  2e-52  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_3933  Acyl-CoA dehydrogenase-like  33.5 
 
 
390 aa  207  3e-52  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.218287  normal 
 
 
-
 
NC_007958  RPD_3693  isovaleryl-CoA dehydrogenase  33.66 
 
 
390 aa  207  3e-52  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  34 
 
 
388 aa  207  4e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  34.71 
 
 
390 aa  206  5e-52  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2739  acyl-CoA dehydrogenase, putative  33.66 
 
 
447 aa  206  6e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  34.39 
 
 
379 aa  206  7e-52  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2470  isovaleryl-CoA dehydrogenase  33.66 
 
 
387 aa  205  9e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0293728  normal  0.0125727 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  34.8 
 
 
381 aa  206  9e-52  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1804  acyl-CoA dehydrogenase domain protein  33 
 
 
390 aa  205  1e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.392184  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  34.56 
 
 
379 aa  205  1e-51  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  34.71 
 
 
379 aa  205  1e-51  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  34.64 
 
 
380 aa  205  1e-51  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1739  isovaleryl-CoA dehydrogenase  32.9 
 
 
390 aa  205  1e-51  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1226  acyl-CoA dehydrogenase domain protein  32.75 
 
 
381 aa  204  2e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  35.38 
 
 
382 aa  204  2e-51  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_007643  Rru_A1948  isovaleryl-CoA dehydrogenase  33.91 
 
 
387 aa  204  2e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.113187  n/a   
 
 
-
 
NC_008261  CPF_0092  butyryl-CoA dehydrogenase  32.84 
 
 
378 aa  204  2e-51  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0289  acyl-CoA dehydrogenase domain protein  34.85 
 
 
391 aa  204  2e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0226098  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  34.24 
 
 
380 aa  204  3e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0802  isovaleryl-CoA dehydrogenase  34.8 
 
 
393 aa  204  3e-51  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1608  isovaleryl-CoA dehydrogenase  34.8 
 
 
393 aa  204  3e-51  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0542  isovaleryl-CoA dehydrogenase  34.8 
 
 
393 aa  204  3e-51  Burkholderia mallei SAVP1  Bacteria  normal  0.470015  n/a   
 
 
-
 
NC_008835  BMA10229_0654  isovaleryl-CoA dehydrogenase  34.8 
 
 
393 aa  204  3e-51  Burkholderia mallei NCTC 10229  Bacteria  normal  0.548122  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0966  acyl-CoA dehydrogenase  33.91 
 
 
387 aa  203  4e-51  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4272  acyl-CoA dehydrogenase domain-containing protein  33.74 
 
 
390 aa  203  4e-51  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0196507 
 
 
-
 
NC_007435  BURPS1710b_A0471  isovaleryl-CoA dehydrogenase  34.8 
 
 
393 aa  203  4e-51  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2056  putative isovaleryl-CoA dehydrogenase  34.8 
 
 
393 aa  203  4e-51  Burkholderia pseudomallei 668  Bacteria  normal  0.108299  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1959  putative isovaleryl-CoA dehydrogenase  35.34 
 
 
393 aa  203  4e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1074  isovaleryl-CoA dehydrogenase  33.91 
 
 
387 aa  203  5e-51  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.490532  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  34.24 
 
 
380 aa  203  5e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_1782  butyryl-CoA dehydrogenase  35.05 
 
 
379 aa  202  6e-51  Desulfotomaculum reducens MI-1  Bacteria  normal  0.257154  n/a   
 
 
-
 
NC_010322  PputGB1_3662  acyl-CoA dehydrogenase domain-containing protein  32.76 
 
 
387 aa  202  9.999999999999999e-51  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000000131881 
 
 
-
 
NC_010623  Bphy_3562  acyl-CoA dehydrogenase domain-containing protein  34.39 
 
 
393 aa  202  9.999999999999999e-51  Burkholderia phymatum STM815  Bacteria  normal  normal  0.364762 
 
 
-
 
NC_009512  Pput_1777  acyl-CoA dehydrogenase domain-containing protein  32.76 
 
 
387 aa  201  1.9999999999999998e-50  Pseudomonas putida F1  Bacteria  normal  normal  0.0186488 
 
 
-
 
NC_010501  PputW619_1812  acyl-CoA dehydrogenase domain-containing protein  32.76 
 
 
387 aa  201  1.9999999999999998e-50  Pseudomonas putida W619  Bacteria  normal  0.0871457  normal  0.415388 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  37.99 
 
 
383 aa  201  1.9999999999999998e-50  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_007511  Bcep18194_B0423  isovaleryl-CoA dehydrogenase  34.15 
 
 
414 aa  201  1.9999999999999998e-50  Burkholderia sp. 383  Bacteria  normal  0.733872  normal 
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  35.73 
 
 
377 aa  201  1.9999999999999998e-50  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010552  BamMC406_5121  acyl-CoA dehydrogenase domain-containing protein  35.24 
 
 
393 aa  201  1.9999999999999998e-50  Burkholderia ambifaria MC40-6  Bacteria  normal  0.975401  normal 
 
 
-
 
NC_008825  Mpe_A3360  isovaleryl-CoA dehydrogenase  35 
 
 
410 aa  201  3e-50  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4064  acyl-CoA dehydrogenase domain-containing protein  32.76 
 
 
424 aa  200  3.9999999999999996e-50  Pseudomonas putida KT2440  Bacteria  normal  0.322511  hitchhiker  0.0046695 
 
 
-
 
NC_010086  Bmul_3466  acyl-CoA dehydrogenase domain-containing protein  34.15 
 
 
393 aa  200  3.9999999999999996e-50  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.360992  normal 
 
 
-
 
NC_010676  Bphyt_4686  acyl-CoA dehydrogenase domain protein  34.39 
 
 
393 aa  200  3.9999999999999996e-50  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0162224  normal 
 
 
-
 
NC_008554  Sfum_1260  acyl-CoA dehydrogenase domain-containing protein  33.82 
 
 
394 aa  200  3.9999999999999996e-50  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.334789  normal 
 
 
-
 
NC_008061  Bcen_3127  acyl-CoA dehydrogenase-like  33.9 
 
 
393 aa  199  7.999999999999999e-50  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.105998  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  34.48 
 
 
379 aa  199  7.999999999999999e-50  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5240  acyl-CoA dehydrogenase domain-containing protein  33.9 
 
 
393 aa  199  7.999999999999999e-50  Burkholderia cenocepacia HI2424  Bacteria  normal  0.288959  normal 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  33.17 
 
 
379 aa  198  1.0000000000000001e-49  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_003910  CPS_1603  isovaleryl-CoA dehydrogenase  32.58 
 
 
389 aa  198  1.0000000000000001e-49  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  34.57 
 
 
377 aa  199  1.0000000000000001e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  34.02 
 
 
395 aa  198  1.0000000000000001e-49  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3656  isovaleryl-CoA dehydrogenase  32.18 
 
 
387 aa  199  1.0000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.179163  normal  0.0293073 
 
 
-
 
NC_010515  Bcenmc03_5032  acyl-CoA dehydrogenase domain-containing protein  33.9 
 
 
393 aa  198  1.0000000000000001e-49  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  32.6 
 
 
389 aa  198  1.0000000000000001e-49  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  33.58 
 
 
379 aa  199  1.0000000000000001e-49  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  34.73 
 
 
380 aa  198  1.0000000000000001e-49  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  33.58 
 
 
381 aa  197  2.0000000000000003e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6658  isovaleryl-CoA dehydrogenase  33 
 
 
390 aa  197  2.0000000000000003e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.53503  normal 
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  33.58 
 
 
381 aa  197  2.0000000000000003e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_007333  Tfu_1777  putative acyl-CoA dehydrogenase  34.49 
 
 
383 aa  197  3e-49  Thermobifida fusca YX  Bacteria  normal  0.0345355  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  33.58 
 
 
381 aa  197  3e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4588  acyl-CoA dehydrogenase domain-containing protein  33.9 
 
 
393 aa  197  3e-49  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  33.75 
 
 
383 aa  196  4.0000000000000005e-49  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>