17 homologs were found in PanDaTox collection
for query gene GM21_4064 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_4064  integrase family protein  100 
 
 
337 aa  699    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_0516  integrase family protein  33.95 
 
 
521 aa  181  2e-44  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1125  phage integrase family protein  29.01 
 
 
533 aa  110  2.0000000000000002e-23  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_3892  site-specific recombinase, phage integrase family protein  31.03 
 
 
437 aa  95.9  9e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0329  Phage integrase  30.57 
 
 
513 aa  90.9  3e-17  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.793111  n/a   
 
 
-
 
NC_010725  Mpop_3233  integrase family protein  27.91 
 
 
526 aa  90.1  5e-17  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1698  integrase family protein  27.66 
 
 
436 aa  86.7  5e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0583  integrase family protein  26.91 
 
 
517 aa  84  0.000000000000003  Shewanella baltica OS195  Bacteria  normal  normal  0.0312483 
 
 
-
 
NC_009665  Shew185_0558  phage integrase family protein  26.91 
 
 
517 aa  84  0.000000000000003  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0589  integrase family protein  26.91 
 
 
517 aa  84  0.000000000000003  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2901  phage integrase family protein  26.07 
 
 
400 aa  78.2  0.0000000000002  Enterobacter sp. 638  Bacteria  normal  normal  0.296521 
 
 
-
 
NC_012917  PC1_1599  integrase family protein  27.78 
 
 
434 aa  73.2  0.000000000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0693815  n/a   
 
 
-
 
NC_012880  Dd703_2950  integrase family protein  23.12 
 
 
451 aa  68.6  0.0000000001  Dickeya dadantii Ech703  Bacteria  normal  0.229456  n/a   
 
 
-
 
NC_008740  Maqu_2309  phage integrase family protein  21.69 
 
 
502 aa  62.4  0.00000001  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2290  integrase family protein  27.78 
 
 
515 aa  59.7  0.00000008  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0310  integrase family protein  31.5 
 
 
579 aa  57  0.0000004  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4604  site-specific recombinase, phage integrase family  27.85 
 
 
531 aa  42.7  0.009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.049698  n/a   
 
 
-
 
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