Gene PC1_1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1599 
Symbol 
ID8132540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1851872 
End bp1853176 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content46% 
IMG OID644864887 
Productintegrase family protein 
Protein accessionYP_003017177 
Protein GI253687987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0693815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG TGAAAGAAAA CCAATCCCAT TTTATGGCAA CACAGTCGGG TTATTCATTT 
TCTCTCTCCG ATACGTATTG GCATCTGGAT AAAAATAATA CGGTCGATGT TTGTTCTGTC 
TTGCAAACAT TACCCCCGTC ATTGCATGAG GGTTATCTCA ATACACTGGC TTTTTTTGCC 
AGTAAACGGA GTGCGGGTTA TGTGGTAAAT ATCAATAACA GCATGAAGCG TTTTATCCGT 
GAGACATCTC CTGGTTACAT TGATGAAGCA GCGATCCTGA ATTACAAAGG CTCACCAGCA 
ACACCGCTGG CAAGTCTGGT GACGCTGAGA TGTTTTCTGA TTAAGTGGCA TTTTCTGGGT 
TATAAAGGTA TCGATGAGAG AGCTATTACT CTGTTGAAAG CCATGAGAAT AAAGGTTAAA 
GCGCCCGGAG ACGTTGTAAA ACAGGAAAAC CCGGAAAAAG GTCCCTTAAC GGATACGGAG 
CATAACGAAT TAAATAAGGC GATCCACCGA GCCAGAGAAA ACGGTCATAT CACGCTGTCT 
GAGGCTGCGA TGGCATTGCT GGTCAGCCTG ACCGGAAGAC GGTCATTGCA AATTACCTCA 
TTAAAATACC GGGACATAAA AGAAGAGGGT AAGGGGGAGG GTGGCTGTTT CATCAATTTC 
CCCAGAGTCA AACAGAGGCT CGGATTCAGG GCGACCTTCA GGCTCCTGAA CGTTGACGAA 
TATCTGTTTG ATATTGTCAG GCAGCAGGCT GAGGCGTCGG TAAGCCGGAT TGAACATATT 
CTTGGCCGTG CGCTTCAACC TACAGAAAAA GAGGACGTGC CTGTTTTTCT GTGTGAGTCG 
GTATGTCATC TGAGACAAGG TCAGAATATG ACGGCGTTAC TGGCTTCGGA CAGGCTTCAC 
GCTTCCCGAA ACAGGGTGAA TGCTGCACTG CTGAAAGTGG TGAACACAGA GCAAGTCATC 
TCTGAAAGAA CTGGTGAAAT CATGAAAATA AGTTCGCGAC GGCTCCGTTA TACCCTTGGC 
ACCAGAATGG CGCGGGACGG GTATGATGTG CAGCTTATTG CGGAGCTGTT AGATCACTCT 
TCCCCTGCCT GTGCCGGAAT TTATGTTGAA AATTTACCTG ACAGTGTCAT CAGGATTAAT 
CAGGCAGTTT CCGACAAATT ATCCTTTTTT GCCGATGTTT TTCTTGGGAA GGCAAAGCCG 
AAAGAAAAAA TCGGTTCATC CTGTATGACA GCCATTCCGT GTCATCAGTG CCTTTATTTC 
AGATCTTTCA CTCACCACTG TAATAACGAG GTGGCGCATG GGTAA
 
Protein sequence
MNKVKENQSH FMATQSGYSF SLSDTYWHLD KNNTVDVCSV LQTLPPSLHE GYLNTLAFFA 
SKRSAGYVVN INNSMKRFIR ETSPGYIDEA AILNYKGSPA TPLASLVTLR CFLIKWHFLG 
YKGIDERAIT LLKAMRIKVK APGDVVKQEN PEKGPLTDTE HNELNKAIHR ARENGHITLS 
EAAMALLVSL TGRRSLQITS LKYRDIKEEG KGEGGCFINF PRVKQRLGFR ATFRLLNVDE 
YLFDIVRQQA EASVSRIEHI LGRALQPTEK EDVPVFLCES VCHLRQGQNM TALLASDRLH 
ASRNRVNAAL LKVVNTEQVI SERTGEIMKI SSRRLRYTLG TRMARDGYDV QLIAELLDHS 
SPACAGIYVE NLPDSVIRIN QAVSDKLSFF ADVFLGKAKP KEKIGSSCMT AIPCHQCLYF 
RSFTHHCNNE VAHG