13 homologs were found in PanDaTox collection
for query gene Dred_3260 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_3260  hypothetical protein  100 
 
 
90 aa  183  7e-46  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1064  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.09 
 
 
334 aa  92.4  2e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3960  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
367 aa  49.3  0.00002  Caulobacter sp. K31  Bacteria  normal  0.273719  normal  0.409706 
 
 
-
 
NC_009485  BBta_3999  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
362 aa  45.8  0.0002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.80171  normal 
 
 
-
 
NC_010511  M446_3313  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
361 aa  45.1  0.0003  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1126  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
351 aa  44.7  0.0004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0081  chemotaxis sensory transducer  27.59 
 
 
362 aa  43.1  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0080  chemotaxis sensory transducer  25.29 
 
 
362 aa  42.7  0.002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0082  chemotaxis sensory transducer  27.59 
 
 
359 aa  42.7  0.002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4363  methyl-accepting chemotaxis sensory transducer  26.44 
 
 
345 aa  42.4  0.002  Methylobacterium populi BJ001  Bacteria  normal  0.139679  normal  0.610806 
 
 
-
 
NC_014148  Plim_2343  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
377 aa  42.4  0.002  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2724  methyl-accepting chemotaxis sensory transducer  26.44 
 
 
341 aa  40.4  0.008  Sphingomonas wittichii RW1  Bacteria  normal  0.894036  normal 
 
 
-
 
NC_007778  RPB_0006  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
359 aa  40.4  0.009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.906877  normal 
 
 
-
 
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