16 homologs were found in PanDaTox collection
for query gene Dfer_5750 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_3233  WD-40-like repeat-containing protein  38.69 
 
 
1048 aa  665    Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5750  surface antigen (D15)  100 
 
 
1072 aa  2196    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0248549 
 
 
-
 
NC_013730  Slin_3587  hypothetical protein  51.37 
 
 
1087 aa  1090    Spirosoma linguale DSM 74  Bacteria  normal  normal  0.137997 
 
 
-
 
NC_013501  Rmar_2405  peptidase S9B dipeptidylpeptidase IV domain protein  25.56 
 
 
1078 aa  239  2e-61  Rhodothermus marinus DSM 4252  Bacteria  normal  0.666802  n/a   
 
 
-
 
NC_013132  Cpin_0419  hypothetical protein  27.47 
 
 
1129 aa  208  4e-52  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1914  WD40 domain protein beta Propeller  22.84 
 
 
1060 aa  101  7e-20  Pedobacter heparinus DSM 2366  Bacteria  normal  0.657093  normal 
 
 
-
 
NC_013501  Rmar_1730  WD40 domain protein beta Propeller  23.09 
 
 
982 aa  97.8  1e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.16258  n/a   
 
 
-
 
NC_013501  Rmar_0629  peptidase S9B dipeptidylpeptidase IV domain protein  22.13 
 
 
1028 aa  96.7  2e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3686  hypothetical protein  22.27 
 
 
1041 aa  72  0.00000000006  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3755  hypothetical protein  21.67 
 
 
1041 aa  69.7  0.0000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3616  hypothetical protein  21.51 
 
 
1041 aa  66.2  0.000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3748  hypothetical protein  23.75 
 
 
1012 aa  60.8  0.0000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.440981 
 
 
-
 
NC_011145  AnaeK_2102  WD40 domain protein beta Propeller  37.74 
 
 
1078 aa  48.9  0.0006  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1737  WD-40-like beta propeller repeat-containing protein  34.55 
 
 
1021 aa  47.8  0.001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.349792  n/a   
 
 
-
 
NC_011891  A2cp1_2193  WD40 domain protein beta Propeller  37.74 
 
 
1077 aa  47.8  0.001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2492  peptidase S9B dipeptidylpeptidase IV domain protein  20.26 
 
 
970 aa  46.2  0.004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
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