| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2492 |
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| Symbol | |
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| ID | 6782489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2884919 |
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| End bp | 2887831 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642768487 |
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| Product | peptidase S9B dipeptidylpeptidase IV domain protein |
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| Protein accession | YP_002139296 |
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| Protein GI | 197118869 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACTT TATTTATTGC GGTAACGCTT GTGCTATGCA CCGTTTCCCT TTCACTGGCA
GTGAAATTCG ACACCTCCTT CACCTACTCG ACCATCGAGA CCGAGCACTT CTCCATCCAT
TACCACCAGG GACTGGAACC GGCCGCCCGG AAGGTCGCGG CCATAGCCGA AGAGACGCAT
CCCCTGCTGA CCCGGGAGTT CCGCTGGCAA CCCGCCGGTA AAACCCAGGT GGTGCTCATC
GACAGCAGCG ACTTCATCAA CGGGCTCGCC GTCACCATCC CTTACAACGC CGTCTACCTG
CAGGTGGTCC CCCCCACGGT CGCCTCCACC CTGGGCGAAT ACGACGACTG GCTCAGGGTC
CTCTTCACCC ACGAGTACGC CCACATACTC TCCTCCGACC CCGCCCGCGG CTACTCCAAG
GTGACCCGGG CCATTTTCGG CAAGCCCTTG CCCACGCTCG ACCCGCTGTC GGTCCTCTTC
TTCTTCGCCA CCGCGCCCCC CAACACCTTC CTGCCGCGCT GGTGGCACGA GGGGATGGCG
ACCTGGGCAG AGACGAAGTA CACGGGGGTC GGACGCGGCA AGGGGAGCTA CTACGACATG
GTGTTCCGCG CCGCCGTCGC GGACGACAAC CTCCCCTCGG TGGACCAGAT CAACGGCGAC
GTCGCCTATT GGCCCTCCGG CCACTTAGCC TACATGTACG GCTACCGCCT GCAGCGCTAC
ATCGCCGACG CCTATGGCCC CGACGCAGCC GGAAAGCTCG CCATCACCCA CTCCGGGCGC
CTTCCTTACC TGATCGGCAG GCCGCCTGAG GACCTTTTCC ACGGCAAGGA TTACAGCGAT
ATCTACCGCG ACATGATCGT CGCCCTGAAG CTGGAGCAGA CGGCGCACAT CAAGGAGCTT
TCCCGCGTCC CCTTCACGCC GCTCACCAGC GTGAACGATC AAGGCGAGAA CCTCACCAAC
CCGCGCTTTT CGCCGGACGG CAGCCGCATC GCCTTCACCA GGCGCGACCC CAACGAGCAC
ACCTCCGTCG TCGTGACCGA CGCCTCCGGA AAAAAGGTGC TGGCGCAGTT CCGGCGCCAG
TCCTCCGATG GAAGCCTCAG CTGGTCCCCC GACGGCAAGA GCGTCTACTT CACCCAGGCC
GAGATCGACC GCGGCTTCAA CACGTACCAG GACCTCTACG TCCGCGACTT GGGGCGCGGC
GAAACGAGGA GGATCACCAA GGGAGAGCGC CTCGGAGACG CGCAGATAGC GCCCGACGGC
AAGACGGTCG CCGCCGTAAT CAGTTCGCGC GGCAGCCAGA ACTTGGCGCT TTTGGACCTG
AGCCAGGGAG AAAAGCCGCA GCCGCGCCAG GTTACAAGCT ACTCGCTGGA ACGGGTAGCG
TCTCCCAACT TCTCGCCCGA CGGCCGCAGC ATCTGCTATG TCCTCACCGA CAACACCGGC
ATGAGCGCGC TCCGTATCTA CGACACGGTC GATAAAACCG ACCGCGCCCT TTTCAGGGCC
AGCCACACCT TCGCCTTCCC GGTCTTCGGG CCCGACGGCT CGACCATCTT CTACATCTCC
GACGAGACCG GGGTGTTCAA CCTCTTCGCA TACGACCTCA AGGGAGGCGC GAGCTACCAG
GTGAGCCACC TTCTTACCGG AGCGATTCAA CCCGCACCAG CCCCGGACGG CTCCTCCATG
CTGCTCTCCA GCTACAGCTC CAAGGGGTTC AAGATCGCCC GCATGGAACT CGACCGCTCC
CGGTGGAGCC TCGCGCGCGG GCCGTCGCTT CCCTCGGCAC GAACAGCCCC CCTTGCTGCA
CCGACAGAGA CGGAACAGGC CACGGCGCCC CCCTCTTCGC GTTACAGCGC AGCAAAGACC
CTGCTGCCGC GCTTCTGGCT GCCTAAGATC TACGGGGACG GCTCGGACCA GGCCGTGATC
GGGGCCTTCA CCGCCGGCGC CGACGTCTTG GGGTACAACT CCTACGCCGT CAGCGGGGCC
TACAGCGAAG GGAGAAAGCG CGGCTATTTC AGCCTTACCT ACCTGAACGA TTACTTCTAC
CCGACCCTGT CGCTTCGGGC GCACAACGAA CCGGTTGTCT ACAGCGACCT GTACCAGAAA
GGGTATGACT ATTGGGAGGT GAACCGCGGG GTGGAGCTGG CAGCGTCCGT ACCTGTCAAC
TTCCTGGAGT CGGCCTACCG CATCAAGGGG GGATACGAGC TTTTGGACCA GCAGGCGTTG
AGCCGCCTGA ACAGCAACGG CACGTTCGGC GGGATCCCCG TCTTCCAGGG GAGCAGAAAC
AACCTCTTCG CGGGGATCAG CTACGAGAGC GCCCTCAAGT ACCCCTACTC CATCAGCTCG
GAAGAGGGGT GCAACCTGGC ATTTCTATAC CGTTACTTCG GCCGCGACAT CGGCAGCGAT
CAAAACCTCT CCGAGTACAG CGCCAGTTTC GAGCAGTACC TGCGCCTGTC GAAAACACGG
CTCCCGCACC AGGTGCTCTA CCTGCGCCTT TCCGGAGCTC TCGCCGACGG AGACCTGCAG
TACGGGCAGC AGGCGTTCCA GATCGGCGGG GCACCAGCGG AGTACAACCA ATACCCGCTG
CGCGGCTACC CCGCCCGCTC CATGACCGGA AAATACGTCG CCACCGGCAC CCTGGAGTAC
CGCGCGCCGC TCGCCTACCC TTTCAGCGGC CCCGGGACGG CTCCGGCTTT CCTGGAGAAG
GTGCACGGCG CGCTCTTCAC CGACGCGGGC CAGGTCTGGG ACGACAACAG GAGTTTTCAC
GCCAACGAAA CGAGGGTCGG TGCCGGAGCG GAACTAAGAG CGGACATGAC CATCGGCTAC
TGGGCCAAGG TCACCCCCGC CGTCGGTTTT GCCCACGGCT TCAACCGCGG CGGGGAAAAC
CAGATATACT TCACGCTGTA CCTCGGCCTG TAG
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| Protein sequence | MRTLFIAVTL VLCTVSLSLA VKFDTSFTYS TIETEHFSIH YHQGLEPAAR KVAAIAEETH
PLLTREFRWQ PAGKTQVVLI DSSDFINGLA VTIPYNAVYL QVVPPTVAST LGEYDDWLRV
LFTHEYAHIL SSDPARGYSK VTRAIFGKPL PTLDPLSVLF FFATAPPNTF LPRWWHEGMA
TWAETKYTGV GRGKGSYYDM VFRAAVADDN LPSVDQINGD VAYWPSGHLA YMYGYRLQRY
IADAYGPDAA GKLAITHSGR LPYLIGRPPE DLFHGKDYSD IYRDMIVALK LEQTAHIKEL
SRVPFTPLTS VNDQGENLTN PRFSPDGSRI AFTRRDPNEH TSVVVTDASG KKVLAQFRRQ
SSDGSLSWSP DGKSVYFTQA EIDRGFNTYQ DLYVRDLGRG ETRRITKGER LGDAQIAPDG
KTVAAVISSR GSQNLALLDL SQGEKPQPRQ VTSYSLERVA SPNFSPDGRS ICYVLTDNTG
MSALRIYDTV DKTDRALFRA SHTFAFPVFG PDGSTIFYIS DETGVFNLFA YDLKGGASYQ
VSHLLTGAIQ PAPAPDGSSM LLSSYSSKGF KIARMELDRS RWSLARGPSL PSARTAPLAA
PTETEQATAP PSSRYSAAKT LLPRFWLPKI YGDGSDQAVI GAFTAGADVL GYNSYAVSGA
YSEGRKRGYF SLTYLNDYFY PTLSLRAHNE PVVYSDLYQK GYDYWEVNRG VELAASVPVN
FLESAYRIKG GYELLDQQAL SRLNSNGTFG GIPVFQGSRN NLFAGISYES ALKYPYSISS
EEGCNLAFLY RYFGRDIGSD QNLSEYSASF EQYLRLSKTR LPHQVLYLRL SGALADGDLQ
YGQQAFQIGG APAEYNQYPL RGYPARSMTG KYVATGTLEY RAPLAYPFSG PGTAPAFLEK
VHGALFTDAG QVWDDNRSFH ANETRVGAGA ELRADMTIGY WAKVTPAVGF AHGFNRGGEN
QIYFTLYLGL
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