Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1730 |
Symbol | |
ID | 8568382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2005890 |
End bp | 2008838 |
Gene Length | 2949 bp |
Protein Length | 982 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | WD40 domain protein beta Propeller |
Protein accession | YP_003291002 |
Protein GI | 268317283 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.16258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGCAC TTCTGCTGGG GCTGGGCCTG GGTGTGCTAA TGGCGTCGGC TGCGTCGGCG CAGTTCTACG AGTCGCACTT CGGCAAAAAC AAGATCCAGT ACGAACGCTT CGACTGGCAC GTCCTGCAGA CCGAACACTT CGACGTCTAC TACTACCCTG AAATGCAGGC GCTGGCCGAA CACGGCGCCT ATTTTGCCGA GGAAGCCTAT CGCACGCTCC AGCAGCGCTT CAACTATGCG CTCCCGCGCC GCACGCCCAT CATTTTCTAT GCGGCCCCCT ATCATTTTCA GCAGACCAAC ACGACGCCGG GCTTCATTCC GGAAGGCGTG GGCGGGTTTT TCGAGCTGAT CAAGGGACGC GTCGTGATTC CGGCCAGCGG CAATCTGTAT CGCTTCCGGC GGGTGATCTG GCACGAACTC GTCCACGTGT TCACCTTCCA TCGGGCTTTT CGGGTGCTGC GCGATCACCG GGTGCCGCCC GACCGCTACC TGCCGCTCTG GTTCACCGAA GGACTGGCCG AGTACTGGTC GGGCCCGCCC GACGACCAGC ACGAGATGAT TCTGCGCGAT GCGCTCTATG CGAACTACCT GGTGCCGCTC GAGAACATGT ACCGCATCTA CGGCACCTTC CTCATGTACA AAGAGGGTGA GGCGCTCTGC CATTTCATTG CCGAAACGTA CGGCGAAGAA AAGCTGCTGG AGTTGATCGA GCAGTTCTGG ATCGACCGCG ACTTTCGACG GGTGATGGAA TACGTGCTGG GAGAGGATTT TTACACGATT TCGGATCGCT GGGAGCAATG GATGAAGAGG CGGTATCTGC CGGAGTTGCC CCGCCAGACG CTGCCGTCGC TGGCTTCCGA GGCCATCGTG GCGCGAGGCT TCAGCACAAA ACCCATCGTC TACCGCCGCC GTGACGGTCG GCGCTTCGTG TACTACCTGG GCAATGAAGG GGCCTACACG AACCTGTACG CGCTGCCGGT CGACTCGGCC TATCGTCCGC GCGGAAAACC GAGAACGCTG ATCCGCACGG GCCGAAGCGA ACGCTTCGAG TCGATTAACC TGCTGGAAGA CCGCATGGAC GTGTCGGCCG AAGGCGTGCT GGCCTTCACC ACACGGAGCG GGGAAGGGGA CGTGCTGCAT CTGTACGACC TGGAGCGGGA AGAACTCGTA ACCACGTACC GTTTCCCGGG CCTGGTGGCG CTCTACAGTC CGACGTGGAG CCCGGACGGG GCGCGGCTGG CCTTCAGTGC CATTGACGAG GGCGGCTGGA TCGATCTTTA CGTGCTGGAA GTGTCCGGCG GACGACTCGA GCGGCTCACG CGCGACCTCT ACGACGATCG CGATCCGGCC TGGAGTCCCG ATGGGCGCTA CCTGGTCTTC GCCTCGGACC GCACGGCCTG GGGCGATCGC TACGGCATGA ATCTGTTCCT CTACGACTTC AATACAGGAC AGATTCACCA GCTCACCGAC GGCTGGCGGC GCGATCGGGA GCCGCGGTGG AGTCCGGACG GTCGCTATGT GGTGTTCGCC AGTGCGGTGA TGGAAGCCGA CGGCCGTTTC GGCCCGCGCA ACATCTGGGC GGTCGAGGTG GCGCCCGCGC TGCCGACCCG TCCGGTAGCT ACCGCGTTTC CGGAAACGGG ATCGGAACCG GTCGGTCCGC CGGTGCGCCG GCTCTACCGG CTGACGAATC TGGCCACGGC CGCCTTCGAC CCACTATGGA CGCCCGACGG CCACCTGCTC TTCAGTGCGT TCGAGCACTA TCGGTTCACC GTGCGCCGGA TACCGGATGT GGCCGAACGC CTGGTCCGGC CGCACCAGCA GGCTACGGTG GCGTTGCTCG GGAGTCGGCC GCCCTGGAAG CCCGGACGGC TCTCGGCCGA CAGCGGCGTG CGCCGCAAGC CCTACCGCCG TCGCTACAGC CTGGACGTGG CCTACGGCGG CATCAGCATC AGCCAGAGTG CACTCTGGGG TACGACCGGC GGGGCCGCGC TGGCCTTTTC GGATCTGCTG GGCGACGATC GCTGGTACGT GACGGTCTTC CACACCGGCC GGGGCAGCGG CGAGCTGCTC AAAGGCCTGA ACGTGGCCGT CTCGCGCGTG CAGCTCCACC GGCGCACCGA CGTGGGCTAC GGCCTTTACC GTTTCGCCGG CCTGCGCTTC GACCTGACCG ATCCGGACGC GGCCGCCGAA TATCCGCTGC TCTGGGAAGA ACTCGTGGGC GGCTACGGCG CGCTGAGCTA TCCGATCTCG ACCTTCCAGC GCATCGAACT GAACACGGCA CTGGCCTGGA GCGACAAGCG TGTGGCGATC CGGGGCGTCC GGCGTCGGGC GCTGTTGCTC TCGAACGCGC TGGCTTTCGT GCACGACAAT GCCCTCTACG GCGCCAACGG GCCCGTCGAA GGCTGGCGTG CCAACCTGAC CGTGGGCTAC ACGACCGACC TGCGCTATTC CAACGTGAGC TACTACACGC TGAGCCTGGA CGTACGCCAC TACCTGCGGC TGATGCGGAA CGTCACGCTG GCGTCCTGGG GGCTGCTGCG CCTCAACGAA GGCCGCGAAG CCAGGCTGTG GTTCCTGGGC GGGAGCTGGG ACCTGCGCGG CTTTCCGCTG TTCGACGTGC GCGGCCGCAA GCTCTGGTTC ACCTCGCACG AACTGCGTTT TCCGATGCTG GAGGCGCCTT CGCTCTATAT TCCGCTGCTG GCACCGTTCG GCATTGCCAA CCTGCGTGGC GCGCTGTTTT TCGATGCGGC CCATGTCTGG AACGACAACT ACCACGAACG CCAGCCGCAG CTCTATGCGG GCGAAACGCT GGGGGCCATC GGGCTGGGCT TCCGGCTGAA CCTGCTCGGT GGACTGGTGC TGCGCTACGA CATCGGCTAC CGCTACCGCG ACGCCTTCCG CCATCGCGAG CGGACGTTCC GGCAGTTTTT CTTCGGATGG GATTTCTGA
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Protein sequence | MRALLLGLGL GVLMASAASA QFYESHFGKN KIQYERFDWH VLQTEHFDVY YYPEMQALAE HGAYFAEEAY RTLQQRFNYA LPRRTPIIFY AAPYHFQQTN TTPGFIPEGV GGFFELIKGR VVIPASGNLY RFRRVIWHEL VHVFTFHRAF RVLRDHRVPP DRYLPLWFTE GLAEYWSGPP DDQHEMILRD ALYANYLVPL ENMYRIYGTF LMYKEGEALC HFIAETYGEE KLLELIEQFW IDRDFRRVME YVLGEDFYTI SDRWEQWMKR RYLPELPRQT LPSLASEAIV ARGFSTKPIV YRRRDGRRFV YYLGNEGAYT NLYALPVDSA YRPRGKPRTL IRTGRSERFE SINLLEDRMD VSAEGVLAFT TRSGEGDVLH LYDLEREELV TTYRFPGLVA LYSPTWSPDG ARLAFSAIDE GGWIDLYVLE VSGGRLERLT RDLYDDRDPA WSPDGRYLVF ASDRTAWGDR YGMNLFLYDF NTGQIHQLTD GWRRDREPRW SPDGRYVVFA SAVMEADGRF GPRNIWAVEV APALPTRPVA TAFPETGSEP VGPPVRRLYR LTNLATAAFD PLWTPDGHLL FSAFEHYRFT VRRIPDVAER LVRPHQQATV ALLGSRPPWK PGRLSADSGV RRKPYRRRYS LDVAYGGISI SQSALWGTTG GAALAFSDLL GDDRWYVTVF HTGRGSGELL KGLNVAVSRV QLHRRTDVGY GLYRFAGLRF DLTDPDAAAE YPLLWEELVG GYGALSYPIS TFQRIELNTA LAWSDKRVAI RGVRRRALLL SNALAFVHDN ALYGANGPVE GWRANLTVGY TTDLRYSNVS YYTLSLDVRH YLRLMRNVTL ASWGLLRLNE GREARLWFLG GSWDLRGFPL FDVRGRKLWF TSHELRFPML EAPSLYIPLL APFGIANLRG ALFFDAAHVW NDNYHERQPQ LYAGETLGAI GLGFRLNLLG GLVLRYDIGY RYRDAFRHRE RTFRQFFFGW DF
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