Gene Rmar_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1730 
Symbol 
ID8568382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2005890 
End bp2008838 
Gene Length2949 bp 
Protein Length982 aa 
Translation table11 
GC content65% 
IMG OID 
ProductWD40 domain protein beta Propeller 
Protein accessionYP_003291002 
Protein GI268317283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.16258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCAC TTCTGCTGGG GCTGGGCCTG GGTGTGCTAA TGGCGTCGGC TGCGTCGGCG 
CAGTTCTACG AGTCGCACTT CGGCAAAAAC AAGATCCAGT ACGAACGCTT CGACTGGCAC
GTCCTGCAGA CCGAACACTT CGACGTCTAC TACTACCCTG AAATGCAGGC GCTGGCCGAA
CACGGCGCCT ATTTTGCCGA GGAAGCCTAT CGCACGCTCC AGCAGCGCTT CAACTATGCG
CTCCCGCGCC GCACGCCCAT CATTTTCTAT GCGGCCCCCT ATCATTTTCA GCAGACCAAC
ACGACGCCGG GCTTCATTCC GGAAGGCGTG GGCGGGTTTT TCGAGCTGAT CAAGGGACGC
GTCGTGATTC CGGCCAGCGG CAATCTGTAT CGCTTCCGGC GGGTGATCTG GCACGAACTC
GTCCACGTGT TCACCTTCCA TCGGGCTTTT CGGGTGCTGC GCGATCACCG GGTGCCGCCC
GACCGCTACC TGCCGCTCTG GTTCACCGAA GGACTGGCCG AGTACTGGTC GGGCCCGCCC
GACGACCAGC ACGAGATGAT TCTGCGCGAT GCGCTCTATG CGAACTACCT GGTGCCGCTC
GAGAACATGT ACCGCATCTA CGGCACCTTC CTCATGTACA AAGAGGGTGA GGCGCTCTGC
CATTTCATTG CCGAAACGTA CGGCGAAGAA AAGCTGCTGG AGTTGATCGA GCAGTTCTGG
ATCGACCGCG ACTTTCGACG GGTGATGGAA TACGTGCTGG GAGAGGATTT TTACACGATT
TCGGATCGCT GGGAGCAATG GATGAAGAGG CGGTATCTGC CGGAGTTGCC CCGCCAGACG
CTGCCGTCGC TGGCTTCCGA GGCCATCGTG GCGCGAGGCT TCAGCACAAA ACCCATCGTC
TACCGCCGCC GTGACGGTCG GCGCTTCGTG TACTACCTGG GCAATGAAGG GGCCTACACG
AACCTGTACG CGCTGCCGGT CGACTCGGCC TATCGTCCGC GCGGAAAACC GAGAACGCTG
ATCCGCACGG GCCGAAGCGA ACGCTTCGAG TCGATTAACC TGCTGGAAGA CCGCATGGAC
GTGTCGGCCG AAGGCGTGCT GGCCTTCACC ACACGGAGCG GGGAAGGGGA CGTGCTGCAT
CTGTACGACC TGGAGCGGGA AGAACTCGTA ACCACGTACC GTTTCCCGGG CCTGGTGGCG
CTCTACAGTC CGACGTGGAG CCCGGACGGG GCGCGGCTGG CCTTCAGTGC CATTGACGAG
GGCGGCTGGA TCGATCTTTA CGTGCTGGAA GTGTCCGGCG GACGACTCGA GCGGCTCACG
CGCGACCTCT ACGACGATCG CGATCCGGCC TGGAGTCCCG ATGGGCGCTA CCTGGTCTTC
GCCTCGGACC GCACGGCCTG GGGCGATCGC TACGGCATGA ATCTGTTCCT CTACGACTTC
AATACAGGAC AGATTCACCA GCTCACCGAC GGCTGGCGGC GCGATCGGGA GCCGCGGTGG
AGTCCGGACG GTCGCTATGT GGTGTTCGCC AGTGCGGTGA TGGAAGCCGA CGGCCGTTTC
GGCCCGCGCA ACATCTGGGC GGTCGAGGTG GCGCCCGCGC TGCCGACCCG TCCGGTAGCT
ACCGCGTTTC CGGAAACGGG ATCGGAACCG GTCGGTCCGC CGGTGCGCCG GCTCTACCGG
CTGACGAATC TGGCCACGGC CGCCTTCGAC CCACTATGGA CGCCCGACGG CCACCTGCTC
TTCAGTGCGT TCGAGCACTA TCGGTTCACC GTGCGCCGGA TACCGGATGT GGCCGAACGC
CTGGTCCGGC CGCACCAGCA GGCTACGGTG GCGTTGCTCG GGAGTCGGCC GCCCTGGAAG
CCCGGACGGC TCTCGGCCGA CAGCGGCGTG CGCCGCAAGC CCTACCGCCG TCGCTACAGC
CTGGACGTGG CCTACGGCGG CATCAGCATC AGCCAGAGTG CACTCTGGGG TACGACCGGC
GGGGCCGCGC TGGCCTTTTC GGATCTGCTG GGCGACGATC GCTGGTACGT GACGGTCTTC
CACACCGGCC GGGGCAGCGG CGAGCTGCTC AAAGGCCTGA ACGTGGCCGT CTCGCGCGTG
CAGCTCCACC GGCGCACCGA CGTGGGCTAC GGCCTTTACC GTTTCGCCGG CCTGCGCTTC
GACCTGACCG ATCCGGACGC GGCCGCCGAA TATCCGCTGC TCTGGGAAGA ACTCGTGGGC
GGCTACGGCG CGCTGAGCTA TCCGATCTCG ACCTTCCAGC GCATCGAACT GAACACGGCA
CTGGCCTGGA GCGACAAGCG TGTGGCGATC CGGGGCGTCC GGCGTCGGGC GCTGTTGCTC
TCGAACGCGC TGGCTTTCGT GCACGACAAT GCCCTCTACG GCGCCAACGG GCCCGTCGAA
GGCTGGCGTG CCAACCTGAC CGTGGGCTAC ACGACCGACC TGCGCTATTC CAACGTGAGC
TACTACACGC TGAGCCTGGA CGTACGCCAC TACCTGCGGC TGATGCGGAA CGTCACGCTG
GCGTCCTGGG GGCTGCTGCG CCTCAACGAA GGCCGCGAAG CCAGGCTGTG GTTCCTGGGC
GGGAGCTGGG ACCTGCGCGG CTTTCCGCTG TTCGACGTGC GCGGCCGCAA GCTCTGGTTC
ACCTCGCACG AACTGCGTTT TCCGATGCTG GAGGCGCCTT CGCTCTATAT TCCGCTGCTG
GCACCGTTCG GCATTGCCAA CCTGCGTGGC GCGCTGTTTT TCGATGCGGC CCATGTCTGG
AACGACAACT ACCACGAACG CCAGCCGCAG CTCTATGCGG GCGAAACGCT GGGGGCCATC
GGGCTGGGCT TCCGGCTGAA CCTGCTCGGT GGACTGGTGC TGCGCTACGA CATCGGCTAC
CGCTACCGCG ACGCCTTCCG CCATCGCGAG CGGACGTTCC GGCAGTTTTT CTTCGGATGG
GATTTCTGA
 
Protein sequence
MRALLLGLGL GVLMASAASA QFYESHFGKN KIQYERFDWH VLQTEHFDVY YYPEMQALAE 
HGAYFAEEAY RTLQQRFNYA LPRRTPIIFY AAPYHFQQTN TTPGFIPEGV GGFFELIKGR
VVIPASGNLY RFRRVIWHEL VHVFTFHRAF RVLRDHRVPP DRYLPLWFTE GLAEYWSGPP
DDQHEMILRD ALYANYLVPL ENMYRIYGTF LMYKEGEALC HFIAETYGEE KLLELIEQFW
IDRDFRRVME YVLGEDFYTI SDRWEQWMKR RYLPELPRQT LPSLASEAIV ARGFSTKPIV
YRRRDGRRFV YYLGNEGAYT NLYALPVDSA YRPRGKPRTL IRTGRSERFE SINLLEDRMD
VSAEGVLAFT TRSGEGDVLH LYDLEREELV TTYRFPGLVA LYSPTWSPDG ARLAFSAIDE
GGWIDLYVLE VSGGRLERLT RDLYDDRDPA WSPDGRYLVF ASDRTAWGDR YGMNLFLYDF
NTGQIHQLTD GWRRDREPRW SPDGRYVVFA SAVMEADGRF GPRNIWAVEV APALPTRPVA
TAFPETGSEP VGPPVRRLYR LTNLATAAFD PLWTPDGHLL FSAFEHYRFT VRRIPDVAER
LVRPHQQATV ALLGSRPPWK PGRLSADSGV RRKPYRRRYS LDVAYGGISI SQSALWGTTG
GAALAFSDLL GDDRWYVTVF HTGRGSGELL KGLNVAVSRV QLHRRTDVGY GLYRFAGLRF
DLTDPDAAAE YPLLWEELVG GYGALSYPIS TFQRIELNTA LAWSDKRVAI RGVRRRALLL
SNALAFVHDN ALYGANGPVE GWRANLTVGY TTDLRYSNVS YYTLSLDVRH YLRLMRNVTL
ASWGLLRLNE GREARLWFLG GSWDLRGFPL FDVRGRKLWF TSHELRFPML EAPSLYIPLL
APFGIANLRG ALFFDAAHVW NDNYHERQPQ LYAGETLGAI GLGFRLNLLG GLVLRYDIGY
RYRDAFRHRE RTFRQFFFGW DF