17 homologs were found in PanDaTox collection
for query gene Cpin_1127 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_1127  hypothetical protein  100 
 
 
120 aa  251  3e-66  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.332513 
 
 
-
 
NC_007005  Psyr_1592  hypothetical protein  54.31 
 
 
172 aa  134  5e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0782726  normal  0.106236 
 
 
-
 
NC_004578  PSPTO_3892  hypothetical protein  51.69 
 
 
205 aa  129  1.0000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0392964  n/a   
 
 
-
 
NC_011004  Rpal_1547  hypothetical protein  46.4 
 
 
133 aa  129  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.683626  n/a   
 
 
-
 
NC_010505  Mrad2831_4863  hypothetical protein  48.06 
 
 
132 aa  123  1e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.368974  normal  0.880715 
 
 
-
 
NC_012917  PC1_1843  hypothetical protein  44.72 
 
 
160 aa  96.3  1e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1617  hypothetical protein  38.89 
 
 
126 aa  95.1  3e-19  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4182  hypothetical protein  31.9 
 
 
116 aa  68.9  0.00000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02499  hypothetical protein  30.58 
 
 
121 aa  63.9  0.0000000006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4231  cupin 2, barrel  36.54 
 
 
121 aa  58.9  0.00000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0456  protein of unknown function DUF861 cupin_3  25.86 
 
 
121 aa  54.3  0.0000006  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_7070  hypothetical protein  29.73 
 
 
120 aa  50.4  0.000009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5207  hypothetical protein  30.77 
 
 
138 aa  46.6  0.0001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0765  hypothetical protein  33.33 
 
 
189 aa  41.2  0.004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.618728  normal  0.762349 
 
 
-
 
NC_010717  PXO_03688  hypothetical protein  34.78 
 
 
172 aa  41.6  0.004  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1171  hypothetical protein  31.34 
 
 
162 aa  40.8  0.006  Burkholderia sp. 383  Bacteria  normal  normal  0.355646 
 
 
-
 
NC_009467  Acry_3129  hypothetical protein  28.95 
 
 
152 aa  40.4  0.008  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
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