Gene PSPTO_3892 details

Gene Information

• Locus tag: PSPTO_3892
• ID: 1185563
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4404888
• End bp: 4405505
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637395242
• Product: hypothetical protein
• Protein accession: NP_793663
• Protein GI: 28871044

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0392964
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTTCGAT TCGCTGCGTG GGCGAATCTG CCCAAACCCT GCGCCAGCTA TCGCGACTGG 
CAATCAGGGC TCATGCAGTT TGTCGCGTTC AGGAACATGT TTATGCCATC GACCGATCGA 
TTTAGTCTGA AGATCCCTAA CGCGCGCCAG CTGGCCGGCT GTGCCGCACT CGCTGCCGCA 
GTGATGCTGC CGGTCAGCGC GGCCCACGCC GCAAAACCAC CCATCGTTGT GACCGAGGGA 
ATCAAGGCTT TCAGGCTGTG CACAGGGCCC GACAACCTGT CTCACGTCAT CGAAGGATCG 
ATTGACCAGA AGGTCATGAC CGATGTCAGC GCCTTGCACT TCAAGGAAAC CCCGGCGCAC 
TCGCAATACG ACTGGCACGC CGCGCCAGAA GAGCAATACG TGATCACCCT TTCCGGTACC 
CTCGAATTTT CCACCACCGG TGGAGAAAAT TTTGTGCTGC ACCCCGGGGA AGTACTGCTG 
GCACAGGACA CTACAGGCCC AGGCCGTCGC TGGAAGCTGC TTGATGACCA GCCTTGGCGA 
CGCGCCTACA TCATCACCAA ACCGGGCGAA AAAGCTGCCT TCGTGCCCAA GGCGGGGGCG 
GCCGACAAAG GGTGCTGA 

 

Protein sequence

MVRFAAWANL PKPCASYRDW QSGLMQFVAF RNMFMPSTDR FSLKIPNARQ LAGCAALAAA 
VMLPVSAAHA AKPPIVVTEG IKAFRLCTGP DNLSHVIEGS IDQKVMTDVS ALHFKETPAH 
SQYDWHAAPE EQYVITLSGT LEFSTTGGEN FVLHPGEVLL AQDTTGPGRR WKLLDDQPWR 
RAYIITKPGE KAAFVPKAGA ADKGC