13 homologs were found in PanDaTox collection
for query gene PC1_1843 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_1843  hypothetical protein  100 
 
 		 160 aa  326  9e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1127  hypothetical protein  44.72 
 
 		 120 aa  96.3  1e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.332513 
 
 
-
 
NC_007005  Psyr_1592  hypothetical protein  41.86 
 
 		 172 aa  92  3e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0782726  normal  0.106236 
 
 
-
 
NC_004578  PSPTO_3892  hypothetical protein  38.76 
 
 		 205 aa  82.8  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0392964  n/a   
 
 
-
 
NC_010505  Mrad2831_4863  hypothetical protein  52.54 
 
 		 132 aa  75.9  0.0000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.368974  normal  0.880715 
 
 
-
 
NC_011004  Rpal_1547  hypothetical protein  38.46 
 
 		 133 aa  64.3  0.0000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.683626  n/a   
 
 
-
 
NC_009379  Pnuc_1617  hypothetical protein  42.42 
 
 		 126 aa  62.4  0.000000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0456  protein of unknown function DUF861 cupin_3  30.59 
 
 		 121 aa  57  0.0000001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5207  hypothetical protein  34.18 
 
 		 138 aa  55.8  0.0000002  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02499  hypothetical protein  37.88 
 
 		 121 aa  54.7  0.0000005  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4231  cupin 2, barrel  32 
 
 		 121 aa  51.6  0.000004  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_4182  hypothetical protein  25.2 
 
 		 116 aa  48.9  0.00003  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_0098  hypothetical protein  36.96 
 
 		 267 aa  41.2  0.006  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
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