10 homologs were found in PanDaTox collection
for query gene CHAB381_A0002 on replicon NC_009713
Organism: Campylobacter hominis ATCC BAA-381



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009713  CHAB381_A0002  putative RepE  100 
 
 
376 aa  764    Campylobacter hominis ATCC BAA-381  Bacteria  n/a    n/a   
 
 
-
 
NC_004252  pDOJH10L_p01  hypothetical protein  31.33 
 
 
303 aa  111  2.0000000000000002e-23  Bifidobacterium longum DJO10A  Bacteria  n/a    n/a   
 
 
-
 
NC_004252  pDOJH10L_p09  hypothetical protein  32.65 
 
 
297 aa  102  1e-20  Bifidobacterium longum DJO10A  Bacteria  n/a    n/a   
 
 
-
 
NC_008503  LACR_A10  replication initiator protein  25.53 
 
 
296 aa  89  1e-16  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.00000639536  n/a   
 
 
-
 
NC_006663  SEA0022  truncated replication protein  37.76 
 
 
214 aa  86.7  7e-16  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008770  CJJ81176_pVir0027  RepE replication protein, putative  29.39 
 
 
278 aa  73.9  0.000000000004  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  hitchhiker  0.000188806  n/a   
 
 
-
 
NC_010486  EcSMS35_C0001  initiator replication protein RepB  35.53 
 
 
233 aa  52  0.00002  Escherichia coli SMS-3-5  Bacteria  normal  n/a   
 
 
-
 
NC_013737  Slin_7051  initiator RepB protein  24.63 
 
 
320 aa  50.8  0.00004  Spirosoma linguale DSM 74  Bacteria  normal  n/a   
 
 
-
 
NC_011316  VSAL_p43_01  putative replication initiation protein  29.25 
 
 
219 aa  47.4  0.0004  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008738  Maqu_4178  initiator RepB protein  30.21 
 
 
409 aa  42.7  0.009  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>