Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | pDOJH10L_p09 |
Symbol | repB |
ID | 1257572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_004252 |
Strand | + |
Start bp | 8278 |
End bp | 9171 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642561687 |
Product | hypothetical protein |
Protein accession | NP_694602 |
Protein GI | 23307862 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5527] Protein involved in initiation of plasmid replication |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATG AGATCGTGAA GTTCAGCAAC CAGTTCAACA ACGTGGCACT GAAGAAGTTC GACGCCGTGC ACCTGGACGT GCTCATGGCG ATCGCCTCAA GGGTGAGGGA GAAGGGCACG GCCACGGTGG AGTTCTCGTT CGAGGAGCTG CGCGGCCTCA TGCGGCTGAG GAAGAACCTG ACCAACAAGC AGCTGGCAGA CAAGATCGTG CAGACGAACG CGCGCCTGCT GGCGCTGAAC TACATGTTCG AGGATTCGGG CAAGATCATC CAGTTCGCGC TGTTCACGAA GTTCGTCACC GACCCGCAGG AGGCGACCCT CGCGGTTGGG GTCAACGAGG AGTTCGCTTT CCTGCTCAAC GACCTGACCA GCCAGTTCAC GCGCTTCGAG CTGGCCGAGT TCGCCGACCT CAAAAGCAAG TACGCCAAGG AGTTCTACCG CAGGGCCAAA CAATACCGCA GCTCCGGAAT CTGGAAGATC AGCCGCGACG AGTTCTGCCG ACTGCTCAGC GTTCCCAAAT CCACAGCCGA GCAAGTGAGA GATCTCAACA AACGAGTCCT CAAGCCGATT ATCGAGGAGT GTGGGCCACT CCTTGGACTG AAGATCGAGC GCCAGTACGT GAAACGCAGG CTGTCGGGGT TCGTGTTCAC GTTCGCCCGC GAGACCCCTC CGGTGATCGA CGCCAGGCCC GTGGAGGCGA GGAAGGCGGA GGATGCGGGC CATTGGACGA GCGTCGCCGG GTACGGCGAG GTGTTCACGA CCACTGAGCT GTTCGACGTG ACGGCCGCGC GTGACCACTT CGACGGCACC GTGGAGGCCG GGGAATGCCG TTTCTGCGCG TTTGACGCGC GCAACCGCGA ACATCATGCG CAGAACGCCG GAAGGCTGTT CTAG
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Protein sequence | MSNEIVKFSN QFNNVALKKF DAVHLDVLMA IASRVREKGT ATVEFSFEEL RGLMRLRKNL TNKQLADKIV QTNARLLALN YMFEDSGKII QFALFTKFVT DPQEATLAVG VNEEFAFLLN DLTSQFTRFE LAEFADLKSK YAKEFYRRAK QYRSSGIWKI SRDEFCRLLS VPKSTAEQVR DLNKRVLKPI IEECGPLLGL KIERQYVKRR LSGFVFTFAR ETPPVIDARP VEARKAEDAG HWTSVAGYGE VFTTTELFDV TAARDHFDGT VEAGECRFCA FDARNREHHA QNAGRLF
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