Gene pDOJH10L_p09 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagpDOJH10L_p09 
SymbolrepB 
ID1257572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_004252 
Strand
Start bp8278 
End bp9171 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content61% 
IMG OID642561687 
Producthypothetical protein 
Protein accessionNP_694602 
Protein GI23307862 
COG category[L] Replication, recombination and repair 
COG ID[COG5527] Protein involved in initiation of plasmid replication 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATG AGATCGTGAA GTTCAGCAAC CAGTTCAACA ACGTGGCACT GAAGAAGTTC 
GACGCCGTGC ACCTGGACGT GCTCATGGCG ATCGCCTCAA GGGTGAGGGA GAAGGGCACG
GCCACGGTGG AGTTCTCGTT CGAGGAGCTG CGCGGCCTCA TGCGGCTGAG GAAGAACCTG
ACCAACAAGC AGCTGGCAGA CAAGATCGTG CAGACGAACG CGCGCCTGCT GGCGCTGAAC
TACATGTTCG AGGATTCGGG CAAGATCATC CAGTTCGCGC TGTTCACGAA GTTCGTCACC
GACCCGCAGG AGGCGACCCT CGCGGTTGGG GTCAACGAGG AGTTCGCTTT CCTGCTCAAC
GACCTGACCA GCCAGTTCAC GCGCTTCGAG CTGGCCGAGT TCGCCGACCT CAAAAGCAAG
TACGCCAAGG AGTTCTACCG CAGGGCCAAA CAATACCGCA GCTCCGGAAT CTGGAAGATC
AGCCGCGACG AGTTCTGCCG ACTGCTCAGC GTTCCCAAAT CCACAGCCGA GCAAGTGAGA
GATCTCAACA AACGAGTCCT CAAGCCGATT ATCGAGGAGT GTGGGCCACT CCTTGGACTG
AAGATCGAGC GCCAGTACGT GAAACGCAGG CTGTCGGGGT TCGTGTTCAC GTTCGCCCGC
GAGACCCCTC CGGTGATCGA CGCCAGGCCC GTGGAGGCGA GGAAGGCGGA GGATGCGGGC
CATTGGACGA GCGTCGCCGG GTACGGCGAG GTGTTCACGA CCACTGAGCT GTTCGACGTG
ACGGCCGCGC GTGACCACTT CGACGGCACC GTGGAGGCCG GGGAATGCCG TTTCTGCGCG
TTTGACGCGC GCAACCGCGA ACATCATGCG CAGAACGCCG GAAGGCTGTT CTAG
 
Protein sequence
MSNEIVKFSN QFNNVALKKF DAVHLDVLMA IASRVREKGT ATVEFSFEEL RGLMRLRKNL 
TNKQLADKIV QTNARLLALN YMFEDSGKII QFALFTKFVT DPQEATLAVG VNEEFAFLLN
DLTSQFTRFE LAEFADLKSK YAKEFYRRAK QYRSSGIWKI SRDEFCRLLS VPKSTAEQVR
DLNKRVLKPI IEECGPLLGL KIERQYVKRR LSGFVFTFAR ETPPVIDARP VEARKAEDAG
HWTSVAGYGE VFTTTELFDV TAARDHFDGT VEAGECRFCA FDARNREHHA QNAGRLF