| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | pDOJH10L_p09 |
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| Symbol | repB |
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| ID | 1257572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004252 |
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| Strand | + |
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| Start bp | 8278 |
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| End bp | 9171 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642561687 |
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| Product | hypothetical protein |
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| Protein accession | NP_694602 |
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| Protein GI | 23307862 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAATG AGATCGTGAA GTTCAGCAAC CAGTTCAACA ACGTGGCACT GAAGAAGTTC
GACGCCGTGC ACCTGGACGT GCTCATGGCG ATCGCCTCAA GGGTGAGGGA GAAGGGCACG
GCCACGGTGG AGTTCTCGTT CGAGGAGCTG CGCGGCCTCA TGCGGCTGAG GAAGAACCTG
ACCAACAAGC AGCTGGCAGA CAAGATCGTG CAGACGAACG CGCGCCTGCT GGCGCTGAAC
TACATGTTCG AGGATTCGGG CAAGATCATC CAGTTCGCGC TGTTCACGAA GTTCGTCACC
GACCCGCAGG AGGCGACCCT CGCGGTTGGG GTCAACGAGG AGTTCGCTTT CCTGCTCAAC
GACCTGACCA GCCAGTTCAC GCGCTTCGAG CTGGCCGAGT TCGCCGACCT CAAAAGCAAG
TACGCCAAGG AGTTCTACCG CAGGGCCAAA CAATACCGCA GCTCCGGAAT CTGGAAGATC
AGCCGCGACG AGTTCTGCCG ACTGCTCAGC GTTCCCAAAT CCACAGCCGA GCAAGTGAGA
GATCTCAACA AACGAGTCCT CAAGCCGATT ATCGAGGAGT GTGGGCCACT CCTTGGACTG
AAGATCGAGC GCCAGTACGT GAAACGCAGG CTGTCGGGGT TCGTGTTCAC GTTCGCCCGC
GAGACCCCTC CGGTGATCGA CGCCAGGCCC GTGGAGGCGA GGAAGGCGGA GGATGCGGGC
CATTGGACGA GCGTCGCCGG GTACGGCGAG GTGTTCACGA CCACTGAGCT GTTCGACGTG
ACGGCCGCGC GTGACCACTT CGACGGCACC GTGGAGGCCG GGGAATGCCG TTTCTGCGCG
TTTGACGCGC GCAACCGCGA ACATCATGCG CAGAACGCCG GAAGGCTGTT CTAG
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| Protein sequence | MSNEIVKFSN QFNNVALKKF DAVHLDVLMA IASRVREKGT ATVEFSFEEL RGLMRLRKNL
TNKQLADKIV QTNARLLALN YMFEDSGKII QFALFTKFVT DPQEATLAVG VNEEFAFLLN
DLTSQFTRFE LAEFADLKSK YAKEFYRRAK QYRSSGIWKI SRDEFCRLLS VPKSTAEQVR
DLNKRVLKPI IEECGPLLGL KIERQYVKRR LSGFVFTFAR ETPPVIDARP VEARKAEDAG
HWTSVAGYGE VFTTTELFDV TAARDHFDGT VEAGECRFCA FDARNREHHA QNAGRLF
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